Glycine soja (wild soybean): 114403394
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Entry
114403394 CDS
T06057
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic-like
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114403394
Spliceosome [BR:
gsj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
114403394
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_long
PPR_3
PPR_1
Suf
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
114403394
NCBI-ProteinID:
XP_028222137
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Position
20:861260..864658
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AA seq
737 aa
AA seq
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MRSTFTLFRSLALSLPHLPWPRPFLFPRPRQFPRLAVTAPESEVLRSAEAEARGPEVEME
VLELSAVPEEWRRARVAWLCKELPAHKAGTLVRILNAQKKWMRQEDATYVLVHCLRVREN
ETAFKVYKWMMQRNWYRFDFALATKLADYMGKERKFSKCREVFDDIINQGRVPSESTFHI
LVVAYLSAPVQGCLDEACSIYNRMIQLGGYQPRLSLHSSLFKALVSNPGILSKNYLKQAE
FIYHHLVTTGLDVHKEIYGGLIWLHSYQDSIDKERIAELREAMLRAGFEEDREVLLSILR
ACAREGEVDEAEKTWVKLLKFESEPPALAFVYKMEVYSKVGMPMKSLDIFREMQSKLGRT
DVAAYNQIIEILCKAQESELAESIMEDFVRSGLKPVTPSYVYLLSMYFTLELHDKLEEAF
YQCLEKCRPNCTLYSIYLNSLVKIGNIDKAEDIFNQMNRDATIGVNARSCNIILSGYLSS
GNHLKAEKVYDFMCLKKYEIKSPLMEKLDYILSLKRKVVKRPISLKLSKEQREILIGLLL
GGLQIDSDDQRRNHIIRFDFDRNSGSHYVLKSHIYHQFYEWLHPTCKPGDNSENIPDKFC
TIASSHFGFYADQFWSKGEPTIPKLVHRWLSPCVLAYWYMYGGHRNSSGDILLKIKGSRE
GVENIVRKFKAMSMDCKVKRKGRVFWIGILGSNSTWFWKLVEPYIKEDEEFSEAGDETKE
QDTEKTEDINFNSDSDE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccaccttcaccctcttccgatctctcgcgctctctcttccccacctcccatgg
ccgcgcccctttctcttcccgcgcccccgccagttccctcgcctcgccgtgacggcgccg
gagagtgaggttctccggtcggcggaggcggaggcgagggggccggaggtggagatggag
gtgttggagctgagcgcggtgccggaggagtggcggagggcgagggtggcgtggctctgc
aaggagctgccagcgcacaaggcggggactctggtgaggatactgaacgcgcagaagaag
tggatgaggcaggaagacgccacatatgtcctcgtccactgcctccgcgttcgcgagaac
gaaaccgcattcaaggtatacaaatggatgatgcaacgaaattggtatcgatttgatttt
gctcttgctaccaagctagcagattacatgggtaaagagcgaaagttttcaaagtgccgt
gaggtatttgatgatattatcaatcaaggccgtgttcctagtgagtcaacattccatata
ttagttgttgcttatcttagtgctcctgttcaaggttgtttggatgaagcatgcagcatt
tacaatcgtatgattcagttgggtggttaccaaccccgtcttagcttacatagttccctc
ttcaaagctcttgtaagcaatccggggatcttgtcaaagaattaccttaagcaagctgag
tttatatatcatcatttggttacaactggccttgatgtgcataaagaaatttatgggggc
ctaatttggctgcatagctatcaggattccatagataaagaaaggatagcagaattgagg
gaagcaatgctacgtgctggatttgaggaggacagagaggtactattatctatcttgagg
gcttgtgcaagggagggggaggtggatgaagctgaaaaaacttgggtcaaacttctcaag
tttgaaagtgaacccccagctctggcttttgtgtataaaatggaagtctactcaaaggtt
ggcatgccgatgaagtcattggatatatttagggaaatgcagtcaaaactaggtagaaca
gatgttgccgcatataatcaaataatagagatactatgcaaagcacaagaatcagaattg
gcagaatcaatcatggaagattttgtcaggagtggtctgaagcctgttacgccatcatat
gtttatttactaagcatgtacttcactttggaattacatgataaattggaagaggcattc
taccagtgcttggagaaatgtcgtccaaattgtactttatacagtatatatctgaattct
ttggtgaaaataggtaatattgacaaggccgaggatatatttaaccaaatgaatcgtgat
gcgactatcggtgttaatgctcgatcatgtaacatcatcttaagtggatacctctcttcg
ggaaaccacttaaaggcagagaaggtctatgactttatgtgtctaaaaaagtatgaaatt
aaatccccattaatggaaaagcttgactatatcctgagcttgaaaaggaaagttgttaaa
agaccaataagcctgaagttaagcaaagagcagagagaaatcttgattgggttgctttta
ggtggtttgcagattgattctgatgaccaaaggaggaatcacattattcgttttgatttt
gatagaaattctggcagccattatgtcctgaagagtcatatatatcaccagttttatgag
tggctgcatcctacttgtaagccaggtgacaatagtgaaaacataccggataagttttgc
accattgcaagctctcattttggcttttatgcagatcagttttggtcaaaaggtgaaccc
acaattccaaaactagtccatagatggttgtcaccatgtgttctggcatactggtacatg
tatgggggccatcgaaattcatcaggggatattttgctgaaaataaagggaagtcgtgag
ggtgttgagaacattgtcagaaaatttaaagccatgtccatggattgcaaagtcaagagg
aaaggaagggttttttggattggtattctgggaagcaattcaacttggttctggaaattg
gttgagccatatatcaaagaagatgaagagttttctgaagcaggcgatgagacaaaggag
caggatacggagaaaactgaagatattaacttcaatagtgattcagatgaatga
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