Glycine soja (wild soybean): 114403513
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Entry
114403513 CDS
T06057
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114403513
Enzymes [BR:
gsj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
114403513
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
114403513
NCBI-ProteinID:
XP_028222330
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Position
20:complement(50269886..50272461)
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AA seq
334 aa
AA seq
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MAGMQKLPYGDVDSSLRALAGRAEGFGRLAIGGLHGPLYFVTTLSDDGPGSLREGCRRKE
PLWIVFEVSGTIHLSSYLSVSSYKTIDGRGQRVKLTGKGLRLKECEHIIICNLEFEGGRG
HDVDGIQIKPNSRHIWIDRCTLRDYDDGLIDITRQSTDITVSRCCFGQHDKTMLIGADPT
HIGDRCIRVTIHHCFFDGTRQRQPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNV
YEAGTKKKTFEFYTEKAVDKEEQKSGFIISEGDMFLNGAEPSLLTENREESMFHPSEYYP
TWTMEAAGHSLREVLLLCTGWQSICRPVDNMVLQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcggggatgcagaagctgccatacggcgacgttgattccagtttgagggccttggcc
ggtcgcgccgagggtttcggccgcctcgccattggtggcctccacggtcctctctatttc
gtcaccactctttcagatgatggccctgggtcccttcgcgaaggttgtcgtagaaaggaa
ccgttgtggattgtgtttgaggtttcgggtacgattcatctttcatcgtacctcagtgtg
tcctcatataagacaatagatggccgagggcagagggtcaaattgactgggaagggtttg
aggctcaaagaatgtgaacacataatcatatgcaaccttgagtttgagggtggcaggggt
catgatgtagacggcattcaaatcaaaccaaattctaggcatatatggattgatcgatgc
acccttcgtgattacgatgatggcctcatagacattacaagacaaagcaccgatatcact
gtatctaggtgttgctttgggcagcatgacaagaccatgctcattggagctgacccgact
cacattggtgatagatgcatccgggtgaccattcaccattgtttctttgatggaacacgg
caaagacagcctcgtgtgagatttggaaaagttcatctgtacaacaattacaccagaaac
tgggggatatatgctgtttgtgccagtgtggaatcccagatatactctcagtgtaatgta
tatgaagcaggaactaagaaaaagacttttgaattttatactgagaaggcggtagataaa
gaggagcagaagtctggcttcataatatcagaaggagacatgtttctgaatggtgctgag
ccaagcttgcttacagaaaacagagaagagtccatgtttcatcctagcgaatattaccca
acatggactatggaagcagctggacattctctcagagaggtcctcctgttatgtacaggt
tggcaatccatttgtaggccagtagataatatggtccttcaataa
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