Glycine soja (wild soybean): 114405458
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Entry
114405458 CDS
T06057
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Module
gsj_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114405458
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
114405458
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
114405458
NCBI-ProteinID:
XP_028223779
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Position
3:30048393..30051390
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AA seq
273 aa
AA seq
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MISNVNGLTIDGSGGLIDGYGSAWWACKSCPRPSVLIINSCNSVSVTNLNMINSPKSHIH
VNGCEGATFSHINISAPGDSPNTDGFDISTSKNIMIEDSTIATGDDCIAISGGSSYINVT
GIACGPGHGISIGSLGKKFDTVQEVYVRNCSFIRTTNGARIKTFPNGMGYAKQITFEDIT
LEQTRNPIIIDQEYRDLTNQAVEVSDVTYRGIHGTSLDGRAITLDCGESGCYGIVLDQIN
IVSCLTGKSASCFCNNAHGTATATNPNCTCLLP
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgatctcaaatgtaaacggtctcacaattgatggaagtggtggattaatcgatggctac
ggttctgcttggtgggcatgcaaatcttgtccacgaccatcggttcttattatcaattcc
tgcaattctgttagtgttactaatctgaacatgattaatagtccaaaatctcacatacac
gtaaatggttgtgagggtgccacattttctcatattaatattagtgctcccggtgatagt
cctaacactgatggatttgacatttctacttccaaaaatatcatgatcgaagattcaact
atagccaccggtgatgattgtattgccatcagtggtggctcctcctacatcaatgttact
gggattgcttgtggaccaggccatggaataagcattggcagcctcggtaaaaagtttgat
acagtccaagaagtttatgtacgaaattgcagcttcataagaactacaaatggagcaaga
atcaagacatttccaaatggaatgggttatgcgaaacaaattacttttgaggatatcacc
ttagaacaaactcgcaacccaataattatagatcaagagtatcgtgatttaacgaatcaa
gcagttgaagtcagtgatgtgacatacagaggaattcatggaacatctctagatggaaga
gctattaccttagattgcggcgagtctggttgttatggaattgtattggatcaaatcaac
attgtctcttgtttaacaggaaagtctgcttcgtgtttttgcaataatgctcatggaaca
gctacagctacaaatccaaattgtacttgcttattaccatga
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