Glycine soja (wild soybean): 114405460
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Entry
114405460 CDS
T06057
Name
(RefSeq) probable polygalacturonase At3g15720 isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Module
gsj_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114405460
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
114405460
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
114405460
NCBI-ProteinID:
XP_028223783
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Position
3:30153466..30156910
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AA seq
388 aa
AA seq
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MQSLITCVLIIAFISPCLCHRWNVGTQNTIYNVIDFGAVGDGKTDDTQAFLKAWQSMCEA
QGTSTLLIPPNKVFLVTSMLLKGPCVAPSVQIQLQGVIVAPTKDAWVEGNLNTLIMISNV
NGLTIDGSGGLIDGYGSAWWACKSCPRPSVLIINSCNSVSVTNLNMINSPKSHIHVNGCE
GATFSHINISAPGDSPNTDGFDISTSKNIMIEDSTIATGDDCIAISGGSSYINVTGIACG
PGHGISIGSLGKKFDTVQEVYVRNCSFIRTTNGARIKTFPNGMGYAKQITFEDITLEQTR
NPIIIDQEYRDLTNQAVEVSDVTYRGIHGTSLDGRAITLDCGESGCYGIVLDQINIVSCL
TGKSASCFCNNAHGTATATNPNCTCLLP
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcctaatcacttgtgttttgattattgcttttatttcaccatgtttatgtcat
aggtggaatgttggaacccaaaacacaatttataatgtgatagattttggtgccgtggga
gatggcaaaacagacgatacacaagcatttttaaaagcatggcaaagcatgtgtgaagca
caagggacatcaactctattaataccaccaaacaaagtattcttggtgacgagcatgtta
ctaaagggtccttgcgtcgccccaagtgttcaaattcagcttcaaggggtaatagttgca
cctaccaaggatgcatgggtggaaggtaatctgaatactttgattatgatctcaaatgta
aacggtctcacaattgatggaagtggtggattaatcgatggctacggttctgcttggtgg
gcatgcaaatcttgtccacgaccatcggttcttattatcaattcctgcaattctgttagt
gttactaatctgaacatgattaatagtccaaaatctcacatacacgtaaatggttgtgag
ggtgccacattttctcatattaatattagtgctcccggtgatagtcctaacactgatgga
tttgacatttctacttccaaaaatatcatgatcgaagattcaactatagccaccggtgat
gattgtattgccatcagtggtggctcctcctacatcaatgttactgggattgcttgtgga
ccaggccatggaataagcattggcagcctcggtaaaaagtttgatacagtccaagaagtt
tatgtacgaaattgcagcttcataagaactacaaatggagcaagaatcaagacatttcca
aatggaatgggttatgcgaaacaaattacttttgaggatatcaccttagaacaaactcgc
aacccaataattatagatcaagaatatcgtgatttaacgaatcaagcagttgaagtcagt
gatgtgacatacagaggaattcatggaacatctctagatggaagagctattaccttagat
tgcggcgagtctggttgttatggaattgtattggatcaaatcaacattgtctcttgttta
acaggaaagtctgcttcgtgtttttgcaataatgctcatggaacagctacagctacaaat
ccaaattgtacttgcttattaccatga
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