Glycine soja (wild soybean): 114405517
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Entry
114405517 CDS
T06057
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Module
gsj_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114405517
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
114405517
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
114405517
NCBI-ProteinID:
XP_028223808
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Position
3:complement(37276009..37279152)
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AA seq
465 aa
AA seq
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MALLKHLLLSFTIIIISFVACYSTLQEDPPSSIIYIDHSPSIDDGRTFKNLIKQSTNVLS
LNRFDKRSSLKKLSVNDYGAKGNGDADDTEAFKKAWDVVCSSGEAILVVPQANYLLKPIR
FSGPCEPNVEVQISGTLEASDDPSDYEDDRRHWLVFDNVKKLFVYGGGTIDGNGKIWWKN
SCKRNKKRPCKDAPTALTFYNCEDLTVENLSIENAQQIHVSFQDSVNIKVSGLTVTAPED
SPNTDGIHVTNTQNIQISSSVIGTGDDCISIVHGSKDVEATDITCGPGHGISIGSLGSGK
SKEFVSGIRVNRAKIFGTKNGVRIKTWQGGSGSSASDIQFQNIGMDNVTNPIIINQNYCD
KKKKPCKKMLSRKSAIQIKNVLYQNITGTSASDIAVKFDCSDKFPCEEIVLQNIDLECEG
GDDAEAMCNNVELSYLGNVRPRCNSKKRKAFTTITSIWKYFSWYI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggccctcctcaaacacctcctcctctcattcacaattatcatcatttcttttgttgct
tgttatagcaccttgcaagaggacccacctagtagtattatatatattgatcattcacct
tctattgatgatggtaggacattcaagaacttgatcaagcaaagcacaaatgttttgagc
ctaaacaggtttgacaagcgtagttcgcttaaaaagcttagtgtcaatgattatggagct
aaggggaatggtgatgctgatgacacagaggctttcaagaaggcttgggatgtagtatgt
tcttctggggaagcaattcttgtggtgcctcaggctaattatctgctcaaaccaatcaga
ttctctggcccttgcgaacctaacgttgaagtccagatttctggaacccttgaagcatca
gatgatccatcagattacgaggatgacagaagacactggcttgtatttgacaatgttaag
aaactatttgtttatggtggtggaaccattgatggaaacggcaagatatggtggaaaaac
tcatgcaaaaggaacaaaaagcgcccttgcaaggatgccccaacggctctgactttctat
aattgcgaggacttgacagttgagaacttgagcatagaaaatgctcaacaaatccatgtt
tcattccaggactccgtgaatattaaggtttctggccttaccgtgaccgcaccagaggat
agccccaacactgatgggattcatgtcaccaatacgcaaaacatccaaatctcaagctct
gttataggaactggtgatgattgcatatctattgtacatggatccaaagatgtagaagcc
acagatattacctgtggaccaggtcatggtatcagtattggaagcttagggtccggaaaa
tccaaggaatttgtttcaggaatacgagtgaatagagccaagatttttggaactaaaaat
ggagttagaatcaagacatggcagggaggttcaggaagcagtgctagcgacatccagttt
cagaacattggaatggacaatgtgaccaaccccataataattaatcagaattattgtgac
aaaaaaaagaagccatgcaaaaaaatgctctcgaggaaatccgcgatccaaatcaagaac
gtgttgtaccagaacataacgggcacaagtgcttctgatatagctgtgaagtttgattgc
agcgataaatttccatgcgaggagatagtgttgcagaacatagacctcgaatgtgaagga
ggagatgatgccgaggctatgtgtaacaatgttgaattgtcttacttaggaaacgttagg
cctcgttgcaactcaaaaaagagaaaggcatttactactattacctccatatggaaatac
ttctcatggtatatatga
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