Glycine soja (wild soybean): 114405738
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Entry
114405738 CDS
T06057
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114405738
Enzymes [BR:
gsj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
114405738
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
114405738
NCBI-ProteinID:
XP_028224019
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Position
1:52025309..52026840
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AA seq
391 aa
AA seq
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MVSHGINSILWHFILVIVIVALFTPTLSAAKQSKINGLKMNVIDRCWRLNPEWRRHRPQL
ATCSVGYTGKMTNNIGDDLIHYKVIDPSDDPINPKSGTLRYGASVIQGKVWITFQRDMHI
KLERPLLISSFTTIDGRGVNVHIADNACIMIFKATNIIIHGIRVHHCKPQAPGIVMGPEG
KVVPLGQVDGDAIRLVTASKIWIDHNTLYNCQDGLLDVTRGSTDVTISNNWFRDQDKVML
LGHDDGYVRDQNMKITVVYNHFGPNCNQRMPRIRHGYAHVANNLYLGWVQYAIGGSMGPS
LKSEANLFIAPTTGSKEVTWRKNSHKNGDIWEFHSVRDAFENGASFAVTKGGRVPKPNYS
KEQCFKVVNVNSVRSLTSSSGVLQCTKTSIC
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggtctctcatggtatcaattctatcctttggcactttattttggttattgtcattgtt
gcccttttcactccaacccttagtgccgcaaaacaatctaaaataaatggcctaaaaatg
aatgtaattgatcgatgttggagactgaatcctgaatggaggaggcatcgacctcaacta
gcaacatgttccgttggttacactggcaagatgacaaacaacattggagatgacctcatc
cattataaagttattgatcctagtgatgatcctataaaccctaaatctggaactttgagg
tatggagcttcagtaattcaaggtaaagtgtggatcacatttcaaagagacatgcacatt
aagcttgagagaccccttcttattagtagtttcaccaccattgatggtcgaggtgttaac
gttcacattgctgacaatgcatgcataatgatctttaaggccaccaatataatcatccat
ggcattcgggttcatcattgcaaacctcaagccccagggatcgtgatgggacctgaagga
aaggtggttcctttaggccaggtagatggggatgcaattagattggttactgcttcaaag
atttggattgaccataatacactttataattgtcaagatggtctactagatgtaacacga
ggttccactgatgtgactatatccaataactggtttagagaccaagacaaggttatgctt
cttgggcacgatgatggatatgtgagagaccaaaacatgaagatcactgttgtgtacaat
cactttggacctaattgtaatcagcgtatgccaaggattcgtcatggatatgcacatgta
gccaacaatttgtacttaggatgggtgcaatatgccattggtggaagcatgggacctagc
ctcaaaagtgaagctaacctctttatagcaccaacaacagggagtaaagaggtgacatgg
agaaaaaatagtcataaaaatggagatatatgggaatttcattcagtgagagatgctttt
gaaaatggagcctcctttgcagtaacaaaaggaggacgtgtgccaaagccaaattatagc
aaggaacaatgctttaaagttgttaatgtcaactccgttagatcattgacaagctcatca
ggtgttttacaatgcactaaaacttctatatgttga
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