Glycine soja (wild soybean): 114405823
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Entry
114405823 CDS
T06057
Name
(RefSeq) histone deacetylase complex subunit SAP18
KO
K14324
histone deacetylase complex subunit SAP18
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114405823
03015 mRNA surveillance pathway
114405823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114405823
03036 Chromosome and associated proteins [BR:
gsj03036
]
114405823
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114405823
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
114405823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
114405823
NCBI-ProteinID:
XP_028224128
LinkDB
All DBs
Position
3:1990616..1992637
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AA seq
151 aa
AA seq
DB search
MSDGGKRQGGRALPPPPRGPPPPPPSRPRLEPVDREKTCPLLLRVFTKIGSHHSMEDFAV
RGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRNAKLSFAFVFPDKNGRFKVQEVGK
TLSYGNGRLDDGKALAELGFEIGDYLDVAIL
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacggaggaaaacgacaaggtggaagagcgttgccgccgccgccaagaggccct
ccgcctcctcccccctctcgccctcgcctcgaacccgtcgatcgcgaaaagacatgtccg
ttactgctgcgagtgttcactaagattgggagtcaccattccatggaagactttgccgtc
agaggcaaagagcccaaagacgaggttcagatttacacctggaaggacgctactctccga
gaactcaccgatcttgtcaaagaagttgctccggctgcaaggagaagaaacgccaaactc
tccttcgcctttgtattccccgacaaaaacggccgtttcaaagttcaagaggtgggcaag
acattatcttatggaaatggaagattagatgatggcaaggctttagccgaacttggtttt
gaaatcggtgactacttggatgtggctattctgtag
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