Glycine soja (wild soybean): 114405982
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Entry
114405982 CDS
T06057
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114405982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsj03000
]
114405982
03021 Transcription machinery [BR:
gsj03021
]
114405982
Transcription factors [BR:
gsj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
114405982
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114405982
RNA polymerase III system
TFIIIB
114405982
RNA polymerase I system
SL1/TIF-1B
114405982
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
114405982
NCBI-ProteinID:
XP_028224318
LinkDB
All DBs
Position
3:complement(4735351..4740351)
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AA seq
200 aa
AA seq
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MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV
IMRIRDPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
TYTAFENIYPVLTEFRKNQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaaggattggaagggagccaaccagtggatctacagaagcatccttctggg
atcgtgcctacccttcaaaatattgtgtccacagtcaatttggactgtaagttggacctc
aaaacaattgcacttcaagctcgtaatgcagagtacaatcctaagcgttttgctgctgtc
attatgaggataagagatcccaaaacaactgctctaatttttgcttctggcaagatggtt
tgtactggagctaagagtgaacaacaatctaaattggcagcaaggaagtatgctcgtatt
atccaaaagcttggcttccctgccaaatttaaggatttcaaaattcagaacattgtcggc
tcttgtgatgtcaagttccccatacggctggagggtcttgcatattcccatggtgctttc
tcaagttatgaaccagagctgtttccaggactaatctaccgtatgaagcaacctaaaata
gtcttgcttatatttgtctctggaaaaattgttctaacaggagccaaggtgagagatgag
acttacactgcctttgaaaacatatatcctgtgcttacggagttcaggaaaaaccaacaa
tga
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