Glycine soja (wild soybean): 114406144
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Entry
114406144 CDS
T06057
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX2
KO
K08681
pyridoxal 5'-phosphate synthase pdxT subunit [EC:
4.3.3.6
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00750
Vitamin B6 metabolism
gsj01100
Metabolic pathways
gsj01240
Biosynthesis of cofactors
Module
gsj_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
114406144
Enzymes [BR:
gsj01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
114406144
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Motif
Pfam:
SNO
GATase_3
BPL_N
DJ-1_PfpI
Peptidase_S51
GATase
Motif
Other DBs
NCBI-GeneID:
114406144
NCBI-ProteinID:
XP_028224539
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Position
3:9105162..9109559
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AA seq
254 aa
AA seq
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MAVVGVLALQGSFNEHIAALRRLGVQGVEIRKPEQLNTISSLIIPGGESTTMAKLAEYHN
LFPALREFVQMGKPVWGTCAGLIFLANKAIGQKTGGQYLVGGLDCTVHRNFFGSQIQSFE
AELSVPELVSKEGGPETFCGIFIRAPAILEAGPEVQVLADYPVPSSRLLSSDSSIEDQTE
NAEKESKVIVAVRQGNILATAFHPELTADTRWHSYFVKMSNEIREEASSSSLVPAQVSST
SQYQQPRNDLPIYR
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgttggcgtcctcgcgctgcaaggatctttcaacgaacacatagctgctctt
agaaggttaggggtgcaaggcgtggagattcgaaagccagagcagcttaacacaattagt
tccctcattatccctggtggagaaagcaccaccatggctaagctcgccgagtatcacaac
ctgtttcctgctttgcgagagtttgtacaaatgggaaagcctgtttggggaacctgtgca
gggcttatattcttggcaaataaagctataggacagaagactggtggtcaatatttggtt
ggtggacttgattgtacagtgcatagaaatttctttggcagccagattcaaagctttgag
gcagagctttcagtgccggagcttgtctccaaggaaggaggtcctgaaacattttgtgga
atttttattcgtgcccctgcaattcttgaagcagggccagaagttcaagtgctggctgat
tatcctgtaccttctagcagattgttgagttctgattcctctattgaagaccaaacggag
aatgctgagaaagaaagtaaagttatagttgctgtgagacaagggaacatattagccact
gctttccatcctgaattgacagccgatactcgatggcatagttatttcgtaaaaatgtca
aatgaaattagagaagaggcctcttcgagtagccttgttcctgcacaagtcagtagtaca
agtcaatatcaacagccccggaatgaccttcctatctatcgatag
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