KEGG   Glycine soja (wild soybean): 114406360
Entry
114406360         CDS       T06057                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03020  RNA polymerase
gsj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114406360
  09124 Replication and repair
   03420 Nucleotide excision repair
    114406360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gsj03021]
    114406360
   03400 DNA repair and recombination proteins [BR:gsj03400]
    114406360
Transcription machinery [BR:gsj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     114406360
DNA repair and recombination proteins [BR:gsj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      114406360
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 114406360
NCBI-ProteinID: XP_028224849
LinkDB
Position
3:28086188..28089938
AA seq 138 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ
YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQD
DEAIEKMLNDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctggggaagaggaagaaaacgccgcagagctcaaaattggagacgagtttttgaag
gcaaagtgcttaatgaactgtgaagtttcattgattcttgagcacaagtatgagcagctt
caacagacatccgatgatcccatgaatcaagtttctcaggtatttgaaaagtcactgcag
tatgtgaagcgtttcagccgctataaaaatcctgatgctgttagacaagttcgagaaatt
ctcgcaagatatcaattggctgagtttgagttgtgtgtccttggaaacctttgcccggaa
actgtggaggaagctattgccatggttccatctatcaagtcaagaggacgggctcaggat
gatgaagccatcgagaaaatgttaaatgacctgtcattgattaagaaatttgaataa

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