KEGG   Glycine soja (wild soybean): 114406566
Entry
114406566         CDS       T06057                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114406566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114406566
   03041 Spliceosome [BR:gsj03041]
    114406566
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     114406566
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     114406566
Spliceosome [BR:gsj03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    114406566
SSDB
Motif
Pfam: RRM_1 RRM_7 Merozoite_SPAM Cut8 RRM_Nup35 Prothymosin RRN3 DARPP-32 Nop14 CCD97-like_C DUF2457 RXT2_N CCSAP
Other DBs
NCBI-GeneID: 114406566
NCBI-ProteinID: XP_028225106
LinkDB
Position
3:complement(34851432..34854465)
AA seq 489 aa
MPPMGRKRKVAPKSSLSTEPPLKQQQPKPENPPQEYEEVEEEVEEEEVEEEVEEEEEEEE
EDEEEEEEEEEEEEENDVVKQQQQQQQDEDDIPISKLLEPLGKDQLLNLLCDAAAKHRDV
EERIRKAADGDPVHRKIFVHGLGWDTTAGTLISAFRQYGEIEDCKAVTDKVSGKSKGYGF
ILFKTRRGAQNALKEPQKKIGNRMTACQLASIGPVSNPPPTPMAPSAAPSSSVSEYTQKK
IYVSNVGADLDPQKLLAFFSRFGEIEEGPLGLDKATGKPKGFCLFVYRNPESARRALEEP
HKDFEGHILHCQKAIDGPKAGKFQQQQQHGNVNAHAQRAQFQRNSNVGANAAAGYGGGGS
AVQPGHLMAPAGPGIGFNPSAAAAAQAALNPAMAQALTALLASQGTLGLTNLLGSIGTSA
AVNPGVPAAGSAVQGGGYSAQPNISPGVVGGYGNQVGLQAAYPNQNQQIGQGGSGRGQYG
GGAAPYMGH
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgccgccgatggggaggaagcgaaaggtagcacccaaatcttctctatccaccgagcca
cctctcaagcagcaacaaccaaaacccgaaaatccccctcaagaatacgaagaagtcgaa
gaggaagttgaggaagaagaggtagaggaagaggtcgaagaggaagaagaagaagaagag
gaggacgaggaagaagaggaggaggaagaagaagaagaagaagaaaacgacgtcgtcaaa
caacagcagcagcaacagcaagacgaagacgacatcccgatatcgaaacttctggaaccg
ttgggcaaggaccagcttctgaaccttctttgcgacgcggcggcgaagcaccgcgatgtg
gaggagaggatccgaaaggcggcggatggagatccggtgcaccggaagatatttgtccac
ggattgggctgggacactaccgccggaaccctaattagcgcgttccggcagtacggagag
atcgaggactgcaaggccgtcaccgacaaggtctccggcaagtccaagggctacggcttc
atcctcttcaagacgcgccgcggcgcgcaaaacgcgctcaaggagccgcagaagaagatc
ggcaaccgcatgacagcgtgccagctggcatccatcggaccggttagcaacccgccgccg
acgccgatggcgccttcagcggctccgtcgtcgtcggtttcggagtacacacagaagaag
atctacgtgagcaacgtcggtgcggacctggatccgcagaagcttctcgcgtttttttca
cggttcggggagattgaggaagggccgttggggcttgacaaggccaccggaaaacctaag
gggttctgtttgtttgtttacaggaatccggagagtgcgaggagagcgttggaagagcct
cataaggatttcgaagggcacattttgcattgccagaaggcgattgatgggcccaaggcc
gggaaatttcaacagcagcagcagcacgggaatgttaatgcgcacgcccagcgggcccag
tttcagaggaatagtaatgttggtgctaatgctgctgcgggttatggtggtggtggttcg
gcggtgcagccggggcacttgatggcgccggctgggccggggattgggtttaatccgtcg
gctgctgcagctgcgcaggctgcgttgaatccggcaatggcacaggcgttgacggccctg
ctggcgtcacaggggacgttggggctgacgaatttgttggggagtattggaacgagtgct
gcggtgaaccctggtgtgcctgctgcagggtctgcggtgcagggtggtggttatagtgct
cagccgaatataagtcccggtgttgttggaggatatgggaatcaggtggggttacaggct
gcgtatccgaatcagaatcagcagatagggcagggtggatctggaagagggcagtatggt
ggtggagctgcgccctacatggggcactag

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