Glycine soja (wild soybean): 114406584
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Entry
114406584 CDS
T06057
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114406584
03036 Chromosome and associated proteins [BR:
gsj03036
]
114406584
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
114406584
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
114406584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
Tex_central_region
HHH_9
HTH_44
SH2
HHH_3
Motif
Other DBs
NCBI-GeneID:
114406584
NCBI-ProteinID:
XP_028225136
LinkDB
All DBs
Position
3:complement(35197826..35206992)
Genome browser
AA seq
1663 aa
AA seq
DB search
MAKGVISDEEDDVELDEEEREPVDGDELEEGREDNEDEDEEEEGQDEYENDGFIVDDIED
EEEQDEEEERAESDEERPKKKKRKKKEEYVLDEDDYELLEDNNINIHRRKESKKFKRLKK
GRRDIEEEPSGLSDEEELVGSGKAGRTAEEKLKRSLFGDDEGAPLEDIAEEEEQGEEEED
ADIGEDDEMADFIVDEEEVDENGAPMRQRKLKKKKTRQAPGVSSSALQEAQELFGDPDEL
ILNRQKNLEMSEFRETRLEDEFEPIVLSEKYMTEKDDWIRELDIPERMQVSDESTGTPPV
DASSIDEESQWICKQLKNGTIPWIPKKISNSQNNEEDDLPVDKDDIIRFLELHHVQKLDI
PFIAMYRKEDCLSLLKDLEHPEAGDDNWDKNDKTPTLKWHKVLWALQDLDKKWLLLQKRK
SALQSYYNKRFEEESRRVYDETRLNLNRQLFESVMRSLKEAGSEREVDDVDSKFNLHFPP
GEAGVDEGQYKRPKRKSMYSTFSKAGLWEVASRFGCSPEQLGLCLTEVNLQELEDPKETP
EEMASNFTCAMYDTPEEVLKCARHMAAVEISCEPSIRKHVRSHFLDHAVVSTCPTADGNT
TIDSFHQFAGVKWLREKPLSKFEDVQWLLIHKAEEEKLIQVTIKLPEQYLNKLIDQFNEY
YISDSVSRSAQLWNDQRKLILHDAIFRFLLPSMEKEARGVLASKAKNWLLMEYGKALWTK
VAVGPYQQKENDLGSDDEAAPRVMACCWGPGKPLTTFVMLDSSGEVLDVLYTGSLTFRSQ
NVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDIYEVIFKMVEENPRDVGH
EMDGLSIVYGDESLPRLYENSRISSEQLPSQQGIVRRAVALGRYLQNPLAMVATLCGPRK
EILSWKLSPLESFLNPDDKFAMVEQIMVDVTNQVGLDINLAISHEWLFAPLQFISGLGPR
KAASLQRSLVRAGAIFTRKDFLTEHKLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDT
RIHPESYILAQELAKDVYEEDGTGDANDDDDALEMAIEHVRDRPSYLKNLDVEEYASGKK
RQNKIQTFYDIKRELIQGFQDWRKQYEEPSQDEEFYMISGETEETLAEGKIVQVTVRRVQ
AQKAICGLESGMTGILLKEDYTDDWRDVIELSDRLHEGDMLTCKIKSIQKNRYQVFLVCK
DSEMRSNRLQNNRDIDPYYHEDRSCFQSDQDKARKEKELAKKHFKPRMIVHPRFQNITAD
EAMEFLSDKDPGESIIRPSSRGPSYLTLTLKINDGVYAHKDIVEGGKEHKDITSLLRIGK
TLKIGEDTFEDLDEVMDRYVDPLVAHLKSMLNYRKFRKGTKAEVDELLRMEKAEYPMRIV
YSFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAYFQRHIDDPQ
HDSAPSIRSVAAMVPMRSPAAGGSSGASVGSGWGGGSNSEGGGWRGHSYDRGDRSSTPGS
RTGRGEYRNNGNQDEHPSGVPRPYGGGRGRGRGRGRGSYNNRGDNSNNERQDSGYGGRWG
SNNTKDSDDGLSNFPGAKVQNSPGREAFPGGWGGGGGSGGGSSGWGGGGGGASNSDNGGW
GGQASGGAGPSDGEQGSSGWGSAPKKAASGNGWGSGNSGGRGW
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggcgtaatctcggatgaagaagacgacgtcgaactcgacgaggaagagagg
gaacccgtcgacggtgacgaattggaagagggtcgcgaggacaacgaagacgaggacgaa
gaagaggaagggcaggatgaatacgaaaatgatgggtttatagtggacgacattgaggac
gaagaggagcaggatgaagaagaagagagagcagaaagtgatgaggagcgaccgaagaag
aaaaagaggaagaaaaaggaggagtatgtccttgatgaagatgattatgaattgctggag
gacaataatatcaatatccatcgtcggaaggagagcaaaaagttcaagcggctgaaaaaa
ggcaggagggatattgaggaggagccctctgggctgtctgatgaggaggagcttgttgga
agtggtaaagctgggcgaactgctgaggagaagcttaaacgcagtttatttggtgatgat
gaaggagctccacttgaagacattgctgaagaggaggagcaaggagaagaggaagaggat
gctgacattggagaagatgatgaaatggctgacttcattgtggatgaagaagaagttgat
gagaatggggctcctatgaggcagaggaagctgaagaaaaagaaaactaggcaggctcct
ggagtctcttcttcagctctacaagaagctcaagaattatttggtgatccagatgagttg
attctgaatcgccagaaaaatctagaaatgagtgaatttagagagactagacttgaagat
gaatttgagcctattgttctttctgagaaatatatgacagagaaggatgactggattagg
gagcttgatattcctgagagaatgcaggtatctgatgaaagtactggtactcctccggtg
gatgcaagtagtatagatgaagagagtcaatggatttgtaagcaacttaaaaatggaaca
attccttggattcccaagaagatttcaaactcccagaataatgaagaggatgacctacca
gttgacaaggatgatattatcagatttttggaactgcatcatgtgcaaaagttagatatt
ccttttattgctatgtatcggaaggaggactgcttaagcctattaaaagacctagagcac
cctgaagctggtgatgataattgggataagaatgacaagacacctactctgaaatggcac
aaggtactttgggctcttcaggacttggacaagaagtggttgcttcttcagaagcggaag
agtgccctccagtcatactataataaacggtttgaagaagagtcccgtcgtgtgtatgat
gaaacaagactaaacttgaatcgtcaattgtttgaatcagttatgagatcgctgaaggaa
gcaggatctgagagggaggttgatgatgttgactccaagttcaacttgcatttcccacca
ggcgaagctggtgttgatgaaggacaatacaagaggccaaaaaggaagtcaatgtatagc
actttcagtaaggctggtctttgggaggttgcaagcaggtttgggtgtagtcctgagcaa
cttggattatgcctaactgaagttaacctgcaagagttggaagatccaaaggaaacacca
gaagagatggcttctaactttacatgtgctatgtatgatacccctgaagaagtacttaaa
tgtgccaggcacatggctgctgttgagataagttgtgagcctagcattaggaaacatgtt
cgcagccactttcttgaccatgcagttgtgtcaacttgtcctactgctgatggaaataca
acaatagattctttccatcagtttgctggggtgaagtggctgcgggagaagcctttgtct
aagtttgaagatgtgcaatggctccttatacacaaggcagaagaggagaaactcattcaa
gttactattaaactgcctgagcagtatcttaataagttaatagaccaattcaatgaatat
tatattagtgacagtgttagcagatctgctcagctgtggaatgatcagaggaagttgata
ctgcatgatgccatttttcgattccttttaccttcaatggaaaaagaggcaagaggtgtc
ctggcaagtaaagccaagaattggttacttatggaatatgggaaggccttatggactaag
gttgccgtgggaccttaccaacagaaggaaaatgatcttggctcagatgatgaggctgct
cctcgggttatggcatgctgttggggccctggaaagccgctaacaacttttgtcatgtta
gattcatcgggtgaagtgcttgatgttctttacactgggtcacttacttttaggtcccag
aatgttaatgaccaacaacggaagaagaatgaccaggaacgggtgttaaagtttatgacc
gatcaccaaccgcatgttgttgttttaggagcagttaacttgtcttgcacccgtttgaag
gaagatatatacgaggtcatttttaagatggtggaggaaaatcctagagatgttgggcac
gaaatggatgggctcagcattgtctatggagatgaatctcttcctcgtctttatgaaaat
tctcgaatttcctctgaacaacttccttcacaacaaggtatagtgaggcgagcagttgct
cttggacgttatctccagaacccattggcaatggttgcaacattatgtggacctagaaag
gaaatattgtcatggaaactgagccctttggagagttttctcaacccagatgataaattt
gcaatggttgagcagattatggtagatgtgaccaatcaggttggcttagacattaattta
gcaataagtcatgaatggttatttgctccattacaatttatttctgggcttggtccacgg
aaggctgcatccttacagagatcccttgtaagagctggtgcaatttttactcggaaggac
tttctgactgaacataaacttggtaaaaaggtgtttgtcaatgcggttggtttcttgcgt
gtccggcgaagtggtttagctgctagcagcagccaatttatcgatttgctggatgataca
agaattcatcctgaatcttatattcttgcacaagagttggccaaagatgtgtatgaagaa
gatggcacaggtgatgcaaatgatgatgatgatgcactggagatggccatagagcatgtg
agagaccgacctagttatttgaaaaaccttgatgttgaggaatatgcttctgggaaaaaa
cgtcagaacaaaatacaaactttctatgacataaaaagagaattgattcaaggttttcag
gattggcgtaagcaatatgaagaaccaagtcaagatgaggaattctatatgatttcaggt
gagactgaagagacccttgctgaaggcaaaatcgttcaagtcacagttcggagagtgcaa
gcccagaaagcaatatgtgggcttgaatctggaatgaccggaatcctcttgaaagaagac
tatacagatgactggagagatgtaattgaattgtctgataggctacatgaaggtgacatg
ctcacttgtaaaattaagtcaattcaaaagaataggtatcaagtcttccttgtatgtaag
gatagtgaaatgagaagtaatcggttacagaataaccgtgatattgacccttattaccat
gaggaccggagctgttttcagagtgatcaagacaaagctcggaaagaaaaggagcttgca
aagaagcatttcaagccaaggatgattgttcatccacgctttcagaacataactgccgat
gaagcaatggagttcttgtctgacaaagatcctggagaaagtattatccgtcctagttca
cgaggaccttcatatcttactttaactcttaaaattaatgatggagtatatgcccataag
gatatagttgaaggtgggaaggaacacaaggacataacaagcttactccgaatcgggaag
acactaaaaattggagaggacacttttgaggacttagatgaggttatggaccgctatgtt
gatcccttggtggctcacttaaagtcaatgttaaactatcgcaaattccgaaagggtaca
aaagcagaagttgatgaacttttgaggatggagaaagctgagtatcctatgcgcatagtc
tatagttttggcatctcccatgaacatcctggcacatttatattaacttatataagaagt
acaaatccacaccatgagtacattgggctttacccaaaaggattcaggtttaggaaaaag
atgtttgaggacattgataggcttgtagcatattttcagagacatattgatgatccccag
catgattcagccccttccattagatctgttgctgctatggtaccaatgcgaagccctgca
gctggtggctcatcaggggcatctgtgggtagtggctggggtggtggctcaaacagtgag
ggtggtggctggagaggtcactcttatgataggggggatcgatcatctacacctggttcc
aggacaggacggggtgaatacagaaacaatgggaatcaggacgaacatcctagtggagtg
cctcgtccatatggtggtggaagagggcgtggacgtggtcgtggtcgaggttcttataac
aatagaggagacaactccaataatgaaaggcaggactctggttatgggggcagatggggt
tctaataatacaaaggactcggatgatggtttaagcaattttccaggggccaaggttcag
aattctcctggaagggaagcttttcctggtggttggggtggtggtggtggaagcggtgga
ggcagtagtggttggggagggggaggaggtggagctagtaacagtgacaatggtggctgg
gggggacaagcgagtggtggtgctggtccaagtgatggtgaacaaggaagctctggctgg
ggatctgcccccaagaaagcagcatcagggaacggatggggatctggaaattctggcggc
cgtggttggtga
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integrated database retrieval system
