KEGG   Glycine soja (wild soybean): 114407367
Entry
114407367         CDS       T06057                                 
Name
(RefSeq) sm-like protein LSM4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03018  RNA degradation
gsj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114407367
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114407367
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114407367
   03041 Spliceosome [BR:gsj03041]
    114407367
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     114407367
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     114407367
Spliceosome [BR:gsj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    114407367
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 114407367
NCBI-ProteinID: XP_028226245
LinkDB
Position
3:43715602..43718304
AA seq 148 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGRGREEGPGGRPTKGIGRGLDD
GGARGAGGSRGRGGPSGKPGGNRGRGRG
NT seq 447 nt   +upstreamnt  +downstreamnt
atgcttcctctttcccttctcaagactgcccaaggccaccctatgttggtggaactgaaa
aatggggagacatataacgggcatttggttaattgcgacacatggatgaacatccatctg
cgagaagtcatttgtacatctaaagacggagatagattttggaggatgcctgaatgctac
atacgaggcaatacaatcaagtaccttcgagtacctgatgaggttattgataaagttcaa
gaagaaaccaagagccgtgcagatcgcaaaccacctggtgttgggcgtggaaggggaaga
ggcagagaggaaggtcctggtgggcgcccaacaaaaggaattgggcgtggtcttgatgat
ggtggtgctaggggagctggaggaagccgaggcaggggtggtcccagtggaaagcctggt
ggaaacagagggcgtggtagaggttga

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