Glycine soja (wild soybean): 114408398
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Entry
114408398 CDS
T06057
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114408398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114408398
Enzymes [BR:
gsj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114408398
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
HECT type E3
114408398
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
ARM_ARMC5
HEAT_2
Motif
Other DBs
NCBI-GeneID:
114408398
NCBI-ProteinID:
XP_028227236
LinkDB
All DBs
Position
4:complement(331442..341760)
Genome browser
AA seq
1891 aa
AA seq
DB search
METRSRKRAEASSAAPSSSSTTPSRSAKRSRLSSSSSSILPVNTRSRSARNNNNNNNSGS
ISFMDPTNESSGSRRDRRGKNFDRENSDKGKEKEQDVRIRDAERERERALALNMESEDVG
DDDDNDSDGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPATAMGGSASSPHQSGRLKK
ILSGLRADGEEGRQVEALTQLCDMLSIGTEDSLSTFSVDSFVPVLVGLLNHESNPDVMLL
AARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEYMDLAEQSLQALKKISQEHPTACL
RAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPPDAADFVMEAVPLLTNLLQYHDSKV
LEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSSSGGGQASLSTPTYTGLIR
LLSTCASGSPLGAKTLLLLGTSGILKDILSGSGVSSNTSVSPALSRPADQIFEIVNLANE
LLPPLPQGTISLPVSSNLFVKGSVVKKSSSGNSGIQEDTNGNVHEILAREKLLNDQPELL
QQFGMDLLPVLMQIYGASVNGPVRHKCLSVIGKLMYFSTAEMIQSLLSVTNISSFLAGVL
AWKDPHVLVPALQISEILMEKLPGTFSKMFVREGVVHAVDQLILAGNSTNISTQTSSAEK
DNDSVSGTSSRSRRYRLRSGNSNPDANPSDDLKSPVPVNVGLPPSSVETPTTNSSIRASV
SSVARAFKDKYFPSDPGSVEVGVSDDLLHLKNLCTKLITGVDDQRSKAKGKVKASGFGLD
DNSSNTEEYLIGVISDMLKELGKGDSVSTFEFIGSGVVEALLNYFSCGYFSKDRISETNL
PKLRQQALSRFKSFVAVALPLSIDNGAVAPMTVLVQKLQNALASLERFPVMLSNSSRSSS
GSARLSSGLSALSQPIKLRLCRAQGEKSLRDYSSNVVLIDPLASLAAIEEFLWARVQRGE
SGQKSTVGTENSESGTTPAGAGVSSPSSYTPSTAHRHSTRTRSSVNIGDTPRKETSQDKG
TSSSKSKGKAVLKPAQEEAQGPQTRNTVRRRAALDKVAQMKPANGDSTSEDEELDISPVE
IAEALVIEDDDISDDEDEDHEDVLRDDSLPVCLPDKVHDVKLGDSAEESTVAPATSDSQT
NAASGSSSKAGTARGSDSADFRSGFSSSSRGAMSFAAAAMAGLGYANSRGFRGGRDRHGC
LLFGSSNDPPKLIFTTGGKQLNRNLSIYQAIQRQLVLDEDDDERFAGSDYVSGDGSSLWG
DIYTITYQRAENQPDKASTGGSSSNTSKSAKSGSALNSSSEAKLHQTSVLDSILQGELPC
DLEKSNPTYNILALLRVLEGFNQLAPRLRVLMVSDSFAKGKILDLDELCVTTGARVLLEE
FVSGKLTPKLARQIQDALALCSGNLPLWCYQLTKACPFLFPFETRRQYFYSTAFGLSRAL
YRLQQQQGADGHGSTTEREVRVGRLQRQKVRVSRNRVLDSAAKVMEMYSSQKAVLEVEYF
GEVGTGLGPTLEFYTILSHDLQKVGLQMWRSYSSDKHQMEIDGDEKKKKSEGSGPNLAGD
GELVQAPLGLFPRPWPTNSDASESSQFSKVIEYFRLLGRVMAKALQDGRLLDLPLSVAFY
KLVLCQDLDLHDILFIDAELGKTLQEFNALVCRKHYIESIGGSYTDTIVNLYFHGAPIED
LCLDFTLPGYPEYTLKPGDEIVDINNLEEYISLVIDATVKTGIMRQIEAFRAGFNQVFDI
SSLQIFTPQELDNLLCGRRELWEAETLADHIKFDHGYNAKSPAIVNLLEIMGEFTPEQQR
AFCQFVTGAPRLPPGGLAVLNPKLTIVRKLSSTAVNNSSNGNGPSESADDDLPSVMTCAN
YLKLPPYSTKEIMYKKLLYAISEGQGSFDLS
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagtcggaagcgggcggaggcttcctcagctgccccttcatcctcgtcc
accaccccttctcgttcagccaagcgctctcgtctttcttcttcttcttcttccatccta
cctgttaatacacgttctcgttccgccaggaataacaacaacaacaacaactccggttcc
atttctttcatggaccccaccaatgaatcctccgggtcccgacgtgatcgccgtggcaag
aatttcgatagggaaaattcggacaaagggaaggagaaggaacaggatgttaggattagg
gatgcggagcgggagcgagagcgagccttggcgttaaacatggagagtgaagatgttggg
gatgacgatgataatgatagtgacggcggtgtgggaattctgcaccagaatttgacgtct
gccagtagtgcccttcaagggcttcttcggaaacttggtgctggtttggatgatttgctt
cctgctactgctatgggcggttctgcgtcatctcctcatcagagtggcagactcaagaag
attttgtctggcttgcgtgccgatggggaagaaggtcgtcaggttgaggcattgacgcag
ctttgtgacatgctctccattggcactgaagattccctcagcacattttcggttgactca
tttgttcctgtgctagtgggcttgcttaatcacgagagcaatcccgatgtcatgcttctt
gcggccagggcgctaacccatttatgtgatgtgcttccttcatcctgtgctgctgttgtg
cattatggtgctgtctctatcttctgtgcgaggctgctcaccatagagtatatggacttg
gctgagcagtctcttcaagcactaaagaagatttctcaggagcacccaactgcctgtctt
agagctggagctctgatggctgttctttcttacttggacttcttctcaacaggagttcag
cgggtggcattgtctactgctgcaaatatgtgcaagaagcttcctcctgatgcagctgac
tttgtgatggaagctgttccacttttgacaaacctccttcagtaccacgactccaaggtc
ctggaacatgcctctgtttgtttgacacgaatagctgaagcatttgcatcatctccagac
aaattagatgaattgtgcaatcatggactggtaacacaagctgcctctctcatttctacc
agcagttctggaggtgggcaggcttctctcagcactccaacatatactggtttgatccgc
cttctttccacatgtgcaagtgggtctcctcttggagctaaaacgttgcttctccttgga
actagtggcattcttaaagatatactatccggttccggtgtttcttctaacacctctgtt
tcgcctgcattgagtaggccagcggatcagatatttgagattgtgaacctggcaaatgaa
cttctgcctccattgcctcaaggaaccatttcccttcctgtcagctccaacttgtttgtg
aaagggtctgttgtgaaaaaatcctcttctggcaattctgggatacaagaagacacaaat
ggaaatgttcatgagatattggctcgtgagaaattattaaatgatcagcctgagttactt
cagcaatttgggatggatctcctcccagttttaatgcagatatatggtgctagcgtcaat
ggtccagttcggcacaaatgtctttctgtcattggaaaattgatgtatttcagcacagct
gagatgatccagtctttactgagtgtaacaaatatatcaagtttcttagctggtgtgtta
gcatggaaagatccacatgttttggttcctgccttgcaaatttcggaaattcttatggaa
aagcttcctggaaccttctctaagatgtttgtcagagaaggtgtggttcatgcagttgac
caacttattttggctggaaattcaaccaatatatccacacaaacatcatctgctgagaag
gataatgattctgtatctggaacttcatctcgctctagacgctatcgcctgcgcagtggt
aattcaaatcccgatgcgaacccttcagatgatttaaagagtccagttccagtaaatgtt
ggtttgccaccaagttctgtagaaactccaacaactaattctagtatccgtgcatctgtt
agctcagttgctagagcttttaaagacaagtactttccttctgatcctgggtctgttgaa
gtgggtgttagtgatgatcttttgcatctgaaaaatctatgcacgaagttgatcactggt
gttgatgaccaaagaagcaaggcaaagggaaaagttaaagcttctggatttggtctggat
gataattctagtaacacagaagagtatttgattggggtgatatctgacatgctaaaggaa
cttggcaaaggagatagtgtatctacttttgaatttatcggtagtggtgttgttgaagcc
ttgctaaattatttttcttgtgggtatttctctaaagatcgaatatcagaaaccaatctc
cccaagcttcgccaacaggcactttcaaggttcaagtcatttgtagctgttgcactacct
ttgagcattgacaatggggctgttgctcctatgactgtcttagttcagaagcttcaaaat
gcgttggcctccttggagcgtttccctgttatgctgagtaattcatctcggtcatctagt
ggaagtgcacgtctctcctctgggctaagtgcattatctcagcccataaaattacgtctc
tgccgagcccagggtgaaaagtcacttagggattattcatccaatgtggtactgattgat
ccattagcaagtctagcagccatcgaggaatttctatgggctcgtgtccagcgtggtgaa
tctggtcagaagtctactgtaggcactgaaaattctgaatctggaacaactcctgctggg
gcaggtgtttcatctccttcctcttatactccctccactgcccatcgtcattctactaga
accagatcatctgttaatataggagatacacctagaaaagaaacatctcaagacaaagga
acgagctcatcaaagagcaagggtaaagctgtattaaaacctgcgcaggaggaagcgcaa
ggaccccaaacaaggaatacagtgcgcagaagagcagctcttgataaagtcgctcaaatg
aaacctgcaaatggcgactcaacttctgaggatgaagaattggatatatctcctgttgaa
attgctgaggctttggtgattgaagatgatgatatttctgatgatgaggatgaagaccat
gaagatgtgctgagggatgattctcttcctgtctgcttgcctgacaaagtgcatgatgtg
aaattgggtgactcagctgaggagagtactgttgctccagcaacaagtgatagccagact
aatgcagcctcaggttcaagcagcaaagctggtacagccaggggttctgactccgctgat
tttaggagtgggttttcatctagctcaaggggtgcaatgtcatttgctgctgctgctatg
gctggacttggatatgctaatagcagaggtttcaggggcggcagagataggcatgggtgc
ctgttgtttggtagttctaatgatcctccgaagttgatttttactactggtgggaagcag
cttaataggaatctgagtatatatcaggcaattcaaagacagcttgtgctagatgaagat
gatgatgagagatttgctggcagtgactatgtatctggtgatggaagcagtctgtggggt
gatatttacaccatcacttatcaaagggcagaaaaccagccagataaggcgtctactgga
ggatcaagttcaaatacttcaaaatctgccaaatctgggtctgccttaaattcaagctca
gaagctaaattgcatcagacatctgttctagacagtatattgcagggagaattgccatgt
gatctagagaaatctaatcccacctacaatattttggcactcctgcgtgtgctggagggt
ttcaaccaacttgcgcctcgtttgagggtcctaatggtttctgatagctttgccaaggga
aaaatcttggatttagatgagctatgtgttacaactggtgctagggtgcttctagaggaa
tttgtaagtggtaagcttactccaaaattggctaggcaaatacaagatgcccttgcacta
tgcagtggtaatcttcccttatggtgttaccagttgactaaagcgtgccctttcttgttt
ccttttgagacccgacgacagtacttttattctaccgcatttgggttatctcgtgcactg
tatcgacttcaacagcagcaaggtgctgatggccatggttcaacaactgagagggaggtg
agagttgggagattgcagcgccaaaaggttcgtgtctctcgaaatcgtgtcctggattct
gctgcaaaagttatggagatgtattctagccaaaaagctgtacttgaagtagaatatttt
ggtgaagttggcactggtctgggtcccacccttgagttttatacaattctaagtcatgat
ttgcaaaaagttggactgcaaatgtggagatcttattcttcagacaaacatcaaatggaa
atagatggagatgaaaagaaaaagaaaagtgaaggctctgggcctaatttggctggagat
ggagaacttgttcaagctcctctggggttgtttcctcggccatggcctacaaattctgat
gcttcagagagtagccagttttcaaaagtcattgagtatttccggctgctaggtcgtgtt
atggctaaagctcttcaagacggacgactactggacctgccattgtcagtggcattttat
aagcttgttctctgccaagatcttgatttgcatgacattctgttcattgatgctgagctt
gggaagactttacaagagttcaatgcccttgtttgtcggaaacattatatagaatctatt
ggtggtagctatacagatacaattgttaacttgtattttcatggtgcaccaatcgaagat
ctttgcttagattttactctccctggttatcctgaatacaccttgaagccaggagatgaa
attgttgatatcaacaatttggaggagtatatatccttggtgatcgatgcaactgtcaag
actggaatcatgcggcaaatagaagcatttagagcagggtttaaccaggtttttgatatc
tcatctttacaaatttttactcctcaagaactagataatttgctttgcggccgcagggag
ttgtgggaggctgagacacttgctgatcatataaaattcgaccatgggtacaatgcaaag
agccctgccattgttaatttacttgaaattatgggagagttcacaccagagcagcaacgt
gccttctgtcaatttgttactggtgcacctaggctgccacctggagggctggcagttcta
aatccaaaactaacgattgtgaggaagctttcgtcaactgcagttaataattcatctaat
gggaatggaccttcagaatcagcagatgatgacttgcctagtgtgatgacatgtgctaat
tacctgaaacttcctccttactctaccaaggaaattatgtacaagaagttgctctatgca
atcagtgagggccagggatcctttgatttatcatga
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integrated database retrieval system
