KEGG   Glycine soja (wild soybean): 114408905
Entry
114408905         CDS       T06057                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114408905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gsj03021]
    114408905
Enzymes [BR:gsj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     114408905
Transcription machinery [BR:gsj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     114408905
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77 DUF2002
Other DBs
NCBI-GeneID: 114408905
NCBI-ProteinID: XP_028227913
LinkDB
Position
4:complement(4950749..4956337)
AA seq 1202 aa
MGHVGSSKDGTKVGLSAAAMDIDDDDDDDLGDVDLDPTSSEILEELGEDMVKYWCKKASM
LFFDEYGLISHQINSFNHFVAIGLQNTFDSFGDLVVTPGFDPSKKGENEHFRYASVKFGK
VKLDKPMFWGGEGNAQEFKMLPRHARIQRMTYASKVKIQVKVQVYVPKKVRSDKFKTGKE
EFLDREIMKEDEREIIIGRLPVMVKSDLCWMKDAEKDDDEFDHGGYFIVKGAEKTFIAQE
QLYLKRLWVMNSPGWMIAYKSQMKRNRMVIKLVGNSRSEEVENGDMCLTVYFLSVEVPVW
VLFFALGVSSDKEIVDLIGCGNDDVRIQNILFASVRDADEKCGAFRRVRNAVQYLEKCVK
SVQFPPSESMQECLEMYVFPGISGLNRKARFLAYMVKGLLLAYTGRRKCDNRDDFRNKRL
ELASELLDRELKVHVAHARKRMAKALQRDLYGDRDVRPIEHYLDASIITNGLQRAFSTGA
WSHPYKRMERISGVVANVGRTNPLQTMAELRRARQQVQYTGKVGDARYPHPSHWGKVCFL
STPDGENCGLVKNLSVTGLVSTDVTDVTESILPKLVDCGMQELVDDTSTHLGSMDKVLLN
GDWVGVCPDSSSFVAELRSRRRRNELPHQVEIKRDQSQHEVRIYSDAGRILRPLLVVGNL
LKIKGFKSDRYSFQSLLDKGVIELIGPEEEEDCCTAWGVEYLFGKEGKRSVKYTHCELDM
SFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFSTTNPNIRVDTLSHQLHYPQKPLF
RTMTSDCLGKPDHSLGQSKIPPKAEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLQRGMF
RSEHIRSYKSEIDNKESSDKKRKPEDIVNFAKLQSKIGRVDSLDDDGFPYVGANLQSGDI
IIGKCAESGADNSVKLKHTERGYVQKVVLSSNDEGKNFAVVSLRQVRSPVLGDKFSSMHG
QKGVLGFLESQENFPFTRQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGILKQAT
PFSTPSVDAITEQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKF
RNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSK
CKNVANVILRPVSGGRKIRGPYCRHCESADDIVVAHVPYGAKLLCQELFSMGINLKFETQ
LC
NT seq 3609 nt   +upstreamnt  +downstreamnt
atgggtcacgtaggttccagcaaggacggcaccaaggtggggctgtccgctgctgcgatg
gacatcgacgacgacgacgacgacgacctcggcgacgtcgacctagaccctacgagctcc
gaaatccttgaagaactcggcgaagacatggtgaaatactggtgcaagaaagcgtcgatg
ctgttcttcgacgagtacggtctgatcagccaccagatcaactcctttaaccacttcgtc
gccatcggcctccaaaacaccttcgactccttcggagacctagtcgtaactcccggtttt
gacccctccaagaagggagaaaacgaacacttccgttacgcctccgttaagttcggcaag
gtgaagctcgacaagcccatgttctggggcggtgaagggaatgcgcaggagttcaagatg
cttccgagacacgcgagaatccagaggatgacctacgcttccaaagtcaaaatccaagtt
aaagttcaggtgtatgttccgaagaaggttcggagtgataagttcaagactgggaaagag
gagttccttgatagagagattatgaaggaagacgagagggaaatcatcattgggagattg
ccagtcatggtcaagtctgatttgtgctggatgaaagacgcggaaaaggatgatgatgaa
tttgaccatggaggttattttatcgttaagggtgcagagaagacttttattgcacaggag
caactgtatttaaagaggctatgggttatgaacagtccagggtggatgattgcctacaag
tcacagatgaagagaaacaggatggttattaaactggtaggcaattccaggagtgaagaa
gtggagaatggggacatgtgtcttactgtatattttttgtctgttgaggttcctgtgtgg
gtactgttttttgctctcggtgtctcatctgacaaagagattgtagatctcattggttgt
ggcaatgatgatgtcagaattcagaatatcctctttgcatctgttcgtgatgctgatgag
aaatgtggagcatttcgaagagttaggaatgctgttcaatatttagaaaaatgtgtaaaa
agtgttcaatttccaccttcggaatctatgcaggagtgccttgaaatgtatgtctttcct
ggaattagtggtttaaatagaaaggcgcgcttccttgcatatatggtgaaaggtctcttg
ctggcttatactggccgcagaaaatgcgacaacagggatgattttcgaaataagaggctt
gaattggccagtgagcttcttgaccgtgagttgaaagtgcatgttgcacatgctcggaag
cgaatggcaaaggctttgcagagagacctttatggagatagggacgtacgcccaattgaa
cattatcttgacgcgtccataattacaaatggcttgcaaagggcattttcaacaggagcg
tggtcacatccgtataagaggatggaaaggatctcaggtgtggttgcaaatgttgggcgc
actaatcccttgcaaaccatggctgagttaagaagagcaaggcagcaggtccagtacaca
ggaaaagttggggatgctagatatccgcatccttctcactggggcaaggtttgtttcctc
tctaccccagatggtgaaaattgtggactagtaaaaaatttgtctgtcacaggattagta
agtactgatgtaactgacgtaactgaatctatactgccaaaattggtggattgtggaatg
caagaacttgttgatgatacttccactcatcttggcagcatggacaaagtcctcctaaat
ggtgattgggttggagtgtgtcccgattccagttcgtttgtggcagagctacgaagtaga
agacgcagaaatgagctgcctcatcaggtggaaatcaagagagaccaatctcagcatgaa
gtgcgcatatactctgatgcaggaaggattctacgtcctcttttggttgttggtaatcta
ctgaagattaaaggatttaaatcagaccgttactctttccagtctctattggacaaaggt
gttattgagctgattggacctgaagaagaggaagactgttgtactgcctggggtgttgag
tatttatttggaaaagaaggaaaacgatctgtaaagtacactcactgtgaacttgatatg
tcattcttattgggtttaagctgttcacttgtaccatttgctaatcatgaccatgcaagg
agggtgctctaccagtctcagaagcactcctcacaggcaattggcttttctacaacaaac
ccgaacattagagttgatactttgtctcaccagttacactatccccaaaagccccttttt
cgaacaatgacttcagattgtcttggaaaaccagaccattcactgggtcaaagtaaaata
cctccaaaggcagaattctataatgggcagaatgcaattgtggctgtcaatgtacatctg
ggatacaatcaagaggattccctggtgatgaaccgtgcttcactgcagcgtggtatgttc
aggtctgagcacataaggagttacaaatctgaaattgacaataaggaatcttcagataag
aagcgaaaacctgaagacattgtaaattttgcaaagctacaaagtaaaattggccgagtt
gatagccttgatgatgatggctttccatatgttggcgctaatctccaaagcggtgatatt
attattgggaagtgtgctgaatccggtgcagacaatagtgtaaagttaaagcacactgaa
aggggttatgtgcaaaaggttgtgctgtcttcaaatgacgaggggaaaaattttgctgtg
gtttcattaagacaggttcgtagtccagttcttggagacaagttctccagtatgcatggt
caaaagggagttttgggatttctggagtctcaggaaaattttcctttcacaagacaaggc
attgttcctgatattgtcataaatccgcatgcatttccctcacgacaaactcctgggcaa
ctcctagaggctgctttaggaaaggggattgcttgtggtggtatactgaaacaagctacg
cctttctccactccttctgttgatgccattactgaacagcttcacagagctgggttttca
agatggggaaatgagagggtatacaatggaaggactggtgagatggttcgatcactcatt
tttatgggaccaacattttaccaacgtctgcaccatatgtctgaagacaaagtgaaattc
cggaacactggtccagttcacccgttgacccgacagcctgtagctgacagaaaacgattt
ggaggtatcaagttcggtgagatggagcgtgattgcctaatagctcatggtgcatcagcc
aacctgtatgaacgcctgtttacactcagtgactcctctcagattcacatctgcagcaaa
tgcaaaaatgttgcaaatgtgatcttgcggccagtgtctggtggacggaaaatacgagga
ccttattgccgtcactgtgaatctgcggatgacattgtggtggcccatgtcccgtatggg
gctaagttattatgccaggagctctttagcatgggcataaatcttaaatttgaaacccaa
ctttgttag

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