Glycine soja (wild soybean): 114409476
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Entry
114409476 CDS
T06057
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114409476
09122 Translation
03013 Nucleocytoplasmic transport
114409476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114409476
03041 Spliceosome [BR:
gsj03041
]
114409476
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114409476
Spliceosome [BR:
gsj03041
]
Complex C
Other components
EJC/TREX
114409476
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114409476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
114409476
NCBI-ProteinID:
XP_028228756
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All DBs
Position
4:complement(18103920..18141881)
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AA seq
605 aa
AA seq
DB search
MEVFKRAIIQPGPPESFALRTVQEVIKPQKQTKLAQDENQFLENILRMLLQEFVSAAVQF
GEKIMQFGQSIDSSETTQGHIPRLLDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMKNCKD
IFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSE
RSALNIKGVFNTSNETKYEKEPLEGICIDFNFYQTFWGLQEYFSNPTSISHAPAKWQKFT
LSLSVVLNTFEAQPLSDEEGDANNLEEEAVNFSIKYLTSSKLMGLELKDPSFRRHVLVQC
LILFDYLKAPGKGDKDLPSENMKEEITSWEERVKKLLELTPPKGTEFLHKIEHILEREKN
WVWWKRDGCLPYEKQRIEKKAVPDGPKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRV
QTPSIMEYWKPLAEDMDPSAGIEADYHHKNNRVYCWKGLRLSARQDLEGFSKFTDHGIEG
VVPLELLPPDVRSKYQAKPNDRSKRSKKEETKGTAHQIEENQIATNATEIDGDGIRTDTT
ATSMEFDAATAPGTQGGTTTPEELQKLSSDTDGGQEAGQLEADAEVEAGMIDGETDADVD
LDTVG
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaggtattcaaaagggccataatacagcctgggccaccggaaagttttgctttgagg
acggttcaagaagtaattaagcctcagaaacaaacaaaattggcccaagatgagaaccag
ttcctagaaaatattctacgtatgttgcttcaggagtttgtgtcagcagcggtacagttt
ggggagaaaatcatgcaatttggccaatcaattgattctagtgaaactacccagggccac
attccccgccttcttgatattgtgctatatctttgtgagaaagaacacattgaaggtggt
atgatttttcagctgttggaagacttgacagaaatgtctacaatgaaaaactgcaaagat
atttttggttatatagagagtaagcaagatatattgggcaagcaagaactttttgctcga
ggaaaacttgtgatgctgagaacctgcaatcagcttcttcgtcgactgtcaaaggcaaat
gatgtggtcttttgtggaagaattctcatgtttctagctcatttctttccgttatcagag
cgatcagccttaaatatcaaaggagtttttaacacatcaaacgaaacaaaatatgaaaaa
gaacccttggaaggcatatgtattgatttcaatttttatcagactttttggggtctacag
gaatatttttctaaccctacttccataagtcatgctccggcaaagtggcagaaatttacc
ttgagtttgtcggttgtactgaatacatttgaagcacaacctttgagtgatgaagaagga
gatgccaataatttggaggaagaggcagttaattttagtataaaatatcttacaagcagc
aaactaatgggtctagagttaaaagatccaagttttcgacgccatgttcttgtacagtgt
cttatattgtttgattacttgaaggcccctggaaaaggtgacaaggatttgccatctgaa
aacatgaaagaagagattacatcatgggaggaacgtgttaaaaaacttcttgaactgaca
ccaccaaaagggacagaatttcttcacaaaattgagcatatattggaacgagaaaaaaat
tgggtgtggtggaaacgtgatggctgcctcccatatgaaaaacaacgtatagagaagaaa
gcagtaccagatgggcccaagaaacgtaggccaagatggagattgggtaataaagaactg
tctcagttgtggaaatgggcagatcaaaatccgaatgctttaactgatcctcaacgtgtt
caaacaccttcaattatggagtactggaaacccttggctgaagatatggatccctctgct
ggaatagaagccgattatcatcacaagaataacagggtttattgttggaaaggtcttagg
ctttcagcacgacaagacttggagggattttctaagtttactgatcatggcattgaaggg
gttgtccctctagaacttttgccacctgatgtccgatctaaataccaagctaaaccaaat
gacagaagtaagcgtagtaaaaaggaagaaacaaaaggcactgcccatcaaattgaggaa
aatcagattgctacaaatgcaactgagatcgatggtgatggcattagaacagataccaca
gcaacatctatggaatttgatgctgcaactgcccctggtacacaaggtgggaccacaacg
cctgaagaacttcagaagctcagctcagacactgatggtggtcaggaagcaggccaattg
gaagctgatgccgaagttgaggccggaatgatagatggagagacagatgcagatgttgat
ttagatactgttggctga
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