Glycine soja (wild soybean): 114409842
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Entry
114409842 CDS
T06057
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114409842
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsj01009
]
114409842
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114409842
03036 Chromosome and associated proteins [BR:
gsj03036
]
114409842
Protein phosphatases and associated proteins [BR:
gsj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
114409842
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
114409842
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
114409842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
114409842
NCBI-ProteinID:
XP_028229275
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Position
4:45052261..45060130
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AA seq
620 aa
AA seq
DB search
MVRFCGAVWTGAYPLSAVVWRAQRTCNCKWMNDRNDNDTSKTHFLFSSSSFRKPSGIANS
AKKENEIACDDVVLAPPPMTTNSDSSSAPLHWKFSQVLGQRLPNEPLQNDDIITAVAFEK
RGDYLAVGDRGGRVVIFERDDRKKNARNDRRELEQRDFATSRHPEFRFKTEFQSHEPEFD
YLKSVEIEEKINKVRWWMSNDSLQFILSTNDKTIKLWKVKEHKVKQVKEMAPPLCSENML
LAERSFVPGLETTANGYHLEWIEKTPKNHLLPQDIDGEIGGMEDPIRAKCQKVYAYAHSF
NINSISNNSDYETFISADDLRINLWNLEVSDQCFNIIDMKPSNMEDLTEVITAAEFHPLH
CNLLAYSSSQGFIRLSDLRQAAICDHASRMFQHGESSGSKSFFTEITSSISDIKFLNDGQ
HLISRNYMNMKLWDMRMESSPVAIFKIHEHLRPKLPELYNNDCIFDKFECCFSGDGLHFA
TGSYSNVVRIFSPGSERKEEIKLEIRGNSHRKVIHQAKSRVRRPSLSNLIPREIYQHGWR
FLYIHFSPYSLFLFVLLPLSSVSFLFQPDVPFCFAAHTDSESSRADFSCNLSSKLLHVAW
HPTCNLVVCAAESSLVLYYA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggtccgtttttgcggtgctgtgtggaccggtgcctatcctctctctgccgttgtgtgg
cgcgcgcaacgaacttgcaattgcaagtggatgaatgaccgcaacgacaacgacacttcc
aaaacacattttttgttttcttcctcaagtttccgaaaaccaagtggaatcgccaattct
gcaaaaaaagagaatgagattgcgtgcgacgacgtcgttttagcaccgccacccatgacg
actaactccgattcttcttctgctcctctccactggaagttctcccaagtactcggccag
cgacttcccaacgagcctctccaaaacgacgacatcataaccgccgttgcgttcgagaaa
cgcggcgattacctcgccgtcggcgaccgaggtgggcgcgttgtgatattcgaacgcgac
gatcggaaaaagaatgctaggaatgaccgaagagaactggagcagcgggatttcgcgact
tcgcggcatcccgaatttcgtttcaaaacggaatttcagagccacgagcccgagtttgat
tacctgaagagtgtggaaattgaagagaagattaacaaagtaaggtggtggatgtccaac
gacagtttgcaatttattctttcaaccaacgacaaaacaattaaattgtggaaggttaag
gaacataaggtaaaacaagttaaagaaatggcccctcctttatgctcagaaaatatgctt
ttggctgaaagaagtttcgtaccagggctggaaaccacggctaatggctatcatttggaa
tggatagagaagacacctaagaatcatttgctgcctcaagacattgatggcgagattggt
ggaatggaagaccctatccgtgcaaagtgccaaaaagtgtatgcttatgctcacagtttc
aatattaactccatctcaaataatagtgattatgagaccttcatctcggcagatgacctt
agaatcaatttgtggaatcttgaagtcagtgatcagtgtttcaatattattgacatgaag
ccatcaaacatggaggatcttaccgaggttataacagcagctgaatttcatcctttgcat
tgtaacctcctggcatatagcagctcacaaggttttattcgtctatctgatttgcgacag
gcagcaatatgtgaccatgcttctagaatgtttcaacatggagagagttctggatcaaag
tcattttttacagaaatcacttcttccatctcagacataaagtttttaaatgatggccag
catcttataagtcgcaattacatgaatatgaagctttgggacatgcgtatggaatcatct
ccagtcgcaatattcaaaattcacgagcatctgcgtcctaagttgccagagttatataat
aatgactgcatatttgacaaattcgagtgctgctttagtggtgatggactccattttgca
actggttcttatagcaatgtcgtgcggatattctccccgggttctgaaaggaaggaagag
atcaaactagaaattagaggaaattctcacaggaaggttattcaccaagctaagtctcga
gttagaaggccttctctaagcaacctaatacctcgtgaaatttaccagcatggttggcgt
ttcctatacatacacttttcaccttattctctctttttatttgtgcttttaccattatct
tccgtttcatttttatttcaacctgacgtccctttctgttttgcagctcacactgattca
gagtctagtagagctgacttttcttgtaacttaagctccaagctgctacatgtagcatgg
catcctacatgcaatctagttgtatgtgctgctgaaagtagcctagtattatattatgcg
tag
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