Glycine soja (wild soybean): 114409852
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Entry
114409852 CDS
T06057
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114409852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114409852
03009 Ribosome biogenesis [BR:
gsj03009
]
114409852
04131 Membrane trafficking [BR:
gsj04131
]
114409852
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsj04147
]
114409852
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
114409852
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
114409852
Membrane trafficking [BR:
gsj04131
]
SNARE
SNARE associated proteins
Others
114409852
Autophagy
Aggrephagy
Other aggrephagy associated proteins
114409852
Exosome [BR:
gsj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114409852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_2
CDC48_2
AAA_33
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
nSTAND3
AAA_17
Mg_chelatase
ATPase_2
AAA_28
AAA_18
Parvo_NS1
IstB_IS21
AAA_lid_PRS2_C
ABC_tran
Viral_helicase1
AAA_7
NACHT
Vps4_C
NB-ARC
DUF815
TsaE
AAA_24
ResIII
Zeta_toxin
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
114409852
NCBI-ProteinID:
XP_028229289
LinkDB
All DBs
Position
4:45161948..45166832
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AA seq
814 aa
AA seq
DB search
MADPTSSNPDKDQSSTEPKSEKKDYSTAILERKKSPNRLVVDEAINDENSVVTLHPETME
KLQFFRGDTVLIKGKKRRDTICVVLADEQCDEPKIRMNKVVRANLRVRLGDVVSVHQCPD
VKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSIEFKLIE
TDPGEYCVVAPDTEIFCEGEPIKREDEERLNDVGYDDVGGVRKQMAQIRELVELPLRHPQ
LFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRK
AFEEAEKNSPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKTRSHVIVIGATN
RPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDNVDLEKVARDTHGYVG
ADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALSSSNPSALRETV
VEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA
KAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGS
SVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP
DESSRLQIFKACLRKSPISKDVDLSALARFTHGFSGADITEICQRACKYAIREDIEKGIE
KERRKRENPEAMEEDDTDEVPEIKPAHFEESMKFARRSVSDADIRKYQLFAQTLQQSRGF
GSEFRFPDQNENTAAGASDPFSSVTAEGDDDLYS
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaacctcatctaaccctgataaggatcaatcctctacggaaccgaaaagt
gaaaagaaggattattccacagcaatattagaacgcaagaagtctcctaaccgacttgtt
gttgatgaagcaattaatgatgaaaattctgtggttactttgcaccctgaaacaatggag
aagcttcagtttttccggggtgacactgttctgataaagggaaagaagcgaagggacaca
atttgtgttgttcttgctgatgaacaatgtgatgaaccaaaaataagaatgaataaggtt
gttcgggctaatcttagagtgagacttggagatgttgtctctgtccatcaatgtcctgat
gtaaagtacgggaaacgagttcacatccttccaattgatgacaccattgagggtgtaact
ggcaacttgtttgatgcatatctgaagccttactttatggagtcataccggccagtgagg
aaaggtgacttgtttcttgttcggggtgggatgcgcagcattgaattcaagctaatagag
actgaccctggtgaatactgtgttgtggcacctgatactgaaatcttctgcgagggagag
ccaatcaaacgggaagatgaagaaagactaaatgatgttggctatgatgatgttggtggt
gttagaaaacaaatggctcaaattcgtgagctggtagaacttccacttagacatcctcag
ctcttcaaatcaattggagttaagcccccaaaaggaatcttgctttatggaccacctggt
tcaggaaagactctgattgcgagagcagttgctaatgagactggtgcattcttctttttg
attaatggaccagaaatcatgtcgaagctggccggtgagagtgaaagcaatctgaggaag
gcatttgaagaagctgaaaagaattccccttctatcatttttattgatgaattagactcg
attgctccaaagagagaaaagacacatggtgaagtggagaggcgtatcgtttcacaactt
ttgactcttatggatggcctcaagacccgatcacatgttatcgttattggagccacaaat
aggcctaatagtattgatcctgctttgagaaggtttggaaggtttgatcgtgagattgac
attggtgtaccggatgaagttggaaggttggaggttcttagaattcatacaaagaatatg
aaactttcagacaatgttgatcttgaaaaagttgccagagacacccatggttatgttgga
gcagatcttgctgctctttgcacagaggctgcactacagtgtatccgggagaaaatggat
gtgattgacttagaggatgaaacaatcgatgctgaggtgttgaattccatggctgtgact
aatgaacactttcaaactgctttaagttcttcaaacccatctgctctgcgtgaaacagtt
gtggaggttccaaatgtttcctgggatgatattggaggcttagagaatgtcaagagggag
cttcaggagactgttcaatacccagtggaacatcctgagaagtttgagaaatttggcatg
tcaccttccaaaggtgttctcttttatggacctcctggctgtggtaaaaccctgcttgca
aaagcaattgctaatgagtgccaggccaactttatcagtgttaagggacctgagttgctg
acaatgtggtttggtgaaagtgaggcaaatgttcgcgagatatttgacaaggctcggcag
tcagctccatgtgtgcttttcttcgacgaacttgactctattgcaactcaacgaggcagt
tctgtaggggacgctggtggtgctgccgatagggtgttgaaccaactcttaacagaaatg
gatggtatgacagctaagaaaacagttttcatcataggggcaacaaacagaccagacatt
atagaccctgcattgctcaggcccggacgtctggatcaattgatttacatccctttaccg
gatgaaagttcacgtcttcaaatcttcaaggcatgcttgaggaagtcaccaatctcaaag
gatgttgacctatcagctcttgcccgttttactcatggattcagtggtgcagacattaca
gaaatttgtcaacgagcgtgcaaatatgccattagggaagatattgaaaagggtattgag
aaggagagaagaaaaagagagaatcctgaagccatggaagaagatgacactgatgaggtc
cctgagataaagcctgcccactttgaggagtctatgaagtttgctcgccggagtgtcagc
gacgcagacataaggaaataccaactctttgctcagaccttgcaacagtctcggggattt
ggatctgagtttcggtttccagatcaaaatgagaacactgcagcaggtgcctcagaccct
ttctcatctgttacagctgagggagatgatgatttgtacagttag
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