Glycine soja (wild soybean): 114409941
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Entry
114409941 CDS
T06057
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114409941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114409941
03036 Chromosome and associated proteins [BR:
gsj03036
]
114409941
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114409941
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114409941
PBAF complex
114409941
GBAF(ncBAF) complex
114409941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
114409941
NCBI-ProteinID:
XP_028229427
LinkDB
All DBs
Position
4:46299690..46302559
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AA seq
529 aa
AA seq
DB search
MNNQAKNIAASSLFGHSGMAPQKHHPNPIQQWNHPNPLLSQSQSHPQTQFPGPFQFSDPQ
NQVFAKAQYSQAHLHSPAARAHPQPQTHPFAHLHSVNTNTANGTSSPATGSAKRATPKPP
LRSHNSLNTNQSMPFKATELTPAARQKKQTPEKVAALLPESALYTQLLDFEAQVDAALAR
RKIDVQEAKLPPHVQKTLRVYVFNTFSNHAKMDAENRKADESWWSLKITGRILEDGMDSV
SGTSQGSSPSYPKFSAFFKKITILLDQSLYPNNHVIVWDSARSPTEQDGFEVKRKGNKEF
TALIAIEMNYTPDKFMVSSPLSKLLGIEVETRSRIIATLFNYVKSRKLQSPNDPSFFICD
PSLQMVFGEEKMDFTMVSQKLSQHLSQPRPIHLEHNIKLSGHSPAVSACYDIQVDVPFPL
EKDMSTFLAGFESQKEIEAYDEAICGSLKKIQEHRRRRAFFLSFSQYPAEFIDTLISSES
KDLKLVAGDASHNVEKELRSEFFNQPWVEDAVIRYLNRKTAGSDAHGRN
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcaagccaagaatattgctgcatcatctttgtttggtcattctggaatggcc
ccacaaaaacaccaccctaaccccattcagcagtggaaccatccaaaccctttactctct
cagtcacagtcacaccctcaaacccaattccctggtccgtttcagttttcagatccccaa
aaccaggtctttgcaaaagctcagtattcacaagcacatttgcattctccggctgcccgt
gctcatccgcaacctcagactcatccttttgcccacttgcatagtgtaaatactaatact
gctaatggtacatcatctccggccaccggaagtgccaagcgagcaaccccaaagcccccg
ttgaggtcccacaattcgttgaatacgaaccaatccatgccgtttaaggccacggaattg
accccagctgctcggcaaaagaagcaaacaccagaaaaggtggctgcacttttgcccgag
tctgctctttacactcagttgcttgattttgaggctcaggtggatgctgctttggccagg
agaaagattgatgtacaggaggctaagctgcctccccatgttcagaaaactcttcgtgtt
tatgtgtttaataccttctcaaatcatgcaaaaatggatgctgagaatagaaaggctgat
gaatcttggtggtctctcaagataactggaaggatattggaagatggtatggattctgtg
tctggaacttcacagggatcgagtccttcatacccgaagttctctgcatttttcaagaaa
attaccatactcttagatcaaagcctttatcccaataatcatgtcattgtatgggatagt
gctcgttcccctaccgaacaggatggttttgaggtgaagaggaaaggaaacaaagaattt
actgcactgattgcaatagaaatgaattatacacctgacaagtttatggtttcatcacca
ctgtctaaacttttagggattgaggtagagactcgctcaagaataatagctactcttttt
aactacgtcaagtccaggaagctacagagcccaaatgacccttcattcttcatatgtgat
ccttctctacaaatggtgttcggggaagagaagatggatttcaccatggtttctcagaag
ttatcacagcatttgtcacaaccacgacctatacatctagagcataacatcaagctttct
ggacattctccagctgtatctgcatgttatgatatacaggttgatgtgccttttccactg
gaaaaggatatgtctacattcttggcaggttttgagagtcagaaagagattgaagcttat
gatgaggcaatttgcggctccttaaagaaaatccaggagcatcgtagaagacgagctttc
tttcttagctttagtcagtatccagcagagtttattgatactttgatttcttctgagagc
aaggatttaaaacttgttgctggagatgccagccataatgttgaaaaggagcttcgttct
gaattcttcaatcaaccatgggttgaggatgctgtcattcgttacctgaaccgcaaaact
gcaggaagtgatgctcatggacgcaattaa
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