Glycine soja (wild soybean): 114409986
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Entry
114409986 CDS
T06057
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 36a-like
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114409986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsj03009
]
114409986
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
114409986
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltransf_31
Methyltr_RsmB-F
FtsJ
PCMT
Motif
Other DBs
NCBI-GeneID:
114409986
NCBI-ProteinID:
XP_028229497
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All DBs
Position
4:46944834..46947929
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AA seq
306 aa
AA seq
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MAPPRGGGFRGGRGDRGRGRGGGGGRGGDRGTPFKARGGGRGGGRGGGGRGGGRGGGRGG
MKGGSKVVVQPHRHDGIFIAKGKEDALVTKNLVPGEAVYNEKRITVQNEDGSKDEYRVWN
PFRSKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSGR
DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILGLNASYYLKAGG
HFVISIKANCIDSTVPAEAVFESEVNKLKADQFKPFEQVTLEPFERDHACVVGGYRMPKK
KKDAAE
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcccagaggtggtgggttcaggggtggtaggggtgacagaggtagaggaagg
ggcggtggtggaggaagaggaggagacaggggcacgccgttcaaagctagaggcggtggc
cgtggaggaggcagaggcggcggtggccgtggaggaggcaggggcggcggccgaggtgga
atgaagggaggtagcaaggttgtggtgcagcctcatagacatgatggtattttcattgcc
aagggtaaagaagacgctcttgttaccaagaatcttgttcctggtgaagctgtttacaat
gaaaaaaggattaccgttcagaacgaagacggttccaaagatgagtacagagtttggaat
cctttccgctcgaagttggctgctgccatccttggtggagttgacaacatttggattaaa
cctggagccagagtcctttacctaggagctgcttctgggaccactgtttctcatgtgtcg
gatgtggttgggcctactggagttgtctatgcagtagagttttcccatagaagcggacgt
gacttggtcaatatggcaaagaagcgaactaatgttatacccattattgaagatgctaga
catccagctaagtacaggatgttggttggaatggttgatgtcatattttctgatgttgct
cagcctgatcaggcaaggattttggggctgaatgcttcatattatctaaaagcagggggt
cattttgttatttcaatcaaggctaactgcatagactccacagtcccggctgaggcagtg
tttgaaagcgaagtgaacaagttaaaggctgatcaattcaaaccattcgagcaagtcacc
cttgaaccatttgagagggaccatgcgtgcgttgttggcggatacagaatgcccaagaag
aaaaaagatgctgctgagtag
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