Glycine soja (wild soybean): 114410320
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Entry
114410320 CDS
T06057
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114410320
Transcription machinery [BR:
gsj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
114410320
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
HTH_11
GerE
Motif
Other DBs
NCBI-GeneID:
114410320
NCBI-ProteinID:
XP_028230033
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Position
4:complement(50293586..50296701)
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AA seq
509 aa
AA seq
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MGVVTVSGSASRTPLGFNTKFSTHRLKRPLIVAFKGDKHNDSALVATQEKIPVPVETAKK
TQKKRIGKSNKLPKRESSPSSMDVDYNEAAAMLENIYKLSPASHTGNAECIDDKIKRVSR
RGKKVVDESEEKELKGDRVVRRQNKNKKAKRLTLDQRISLKNNKRGDEVIPTRKKRNFRN
RIEKIEELIREYSVSNDFISMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQKE
LAREPADGELADATNMSITQVKKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRF
QDLCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSSFIRVPFGLESVRAE
IQKAKTELTFKLQRSPTEEEIIERVHISPERYHDIIKASKSILSLNSRHTTTQEEFINGI
VDDDGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNIS
REMVRKHEVKALMKLNHSARLDYLRRYVV
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctggctcagcttctcggactccattaggattcaatacgaag
ttttccactcatcgtttgaagagacctttaattgtagcatttaaaggggataagcacaat
gactcagctttggttgcaacacaagagaaaattcctgtgccggttgaaacggcaaagaag
acgcagaaaaaaaggataggaaaaagtaacaaactacctaagagagaaagttctccatct
tccatggatgtggactacaatgaagctgctgctatgcttgaaaatatatacaaactcagc
cctgcttctcataccggtaatgcagaatgtatagatgataaaatcaaaagagtctctcgg
agagggaagaaggttgttgatgaaagtgaagaaaaggagttaaagggtgatagggtggtc
agaaggcagaacaagaacaagaaagctaaacggttgactcttgatcagagaatttcatta
aagaataacaaaagaggggacgaagtcattccgactcgaaagaaaagaaactttaggaac
agaattgagaagattgaagaacttattagggaatattcagtatcaaatgattttatcagt
atggattggaaaagaatgagaatacctcccgttctttcttcttcagagcatgcttggttg
ttcaaattgatgcaacctatgaaggcactgcttcaagtgaaagaagatttacagaaggag
ctagcaagagaacctgcagatggtgaactagctgatgcaacaaacatgagcattactcaa
gtaaagaaagcaatagatgttggtcaagctgctagaaacaaactcataaagcacaatctc
cggcttgtcttgttcgtgatcaacaaatattttacagattttgcaagtggccctaggttt
caagatctttgtcaggcaggagtaaagggacttataacagcaattgatcgttttgagcca
aacaggagatttcggttatcaacatatagtttgttttggataagacatgctatcattcgt
tcgatgactctctcaagcttcatacgtgttccctttggacttgaatccgttcgagcagaa
atccaaaaggctaaaactgagttaacatttaagcttcagaggtcaccaacagaggaagaa
ataatagaaagagttcatatatcccctgaaagataccatgacataattaaggcatcaaaa
tccattctttcgctgaactcaagacatacaactacacaagaggagttcattaatgggatt
gttgatgatgatggtgttaatggtgataataggaagcaacctgctctactaaggcttgct
cttgatgatgtgcttgattccctgaagccgaaggagagcttggtgatcagacagagattt
ggacttgacggcaagggtgacagaacgttgggagaaattgctgggaatttgaatatatct
agggaaatggttagaaagcacgaagtcaaggctcttatgaagctcaaccattcagctcga
ttggattatcttcgccgttatgttgtataa
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