Glycine soja (wild soybean): 114410394
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Entry
114410394 CDS
T06057
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114410394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114410394
03036 Chromosome and associated proteins [BR:
gsj03036
]
114410394
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114410394
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114410394
PBAF complex
114410394
GBAF(ncBAF) complex
114410394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
DUF3306
DNA_pol_B_N
Motif
Other DBs
NCBI-GeneID:
114410394
NCBI-ProteinID:
XP_028230132
LinkDB
All DBs
Position
4:complement(51073772..51080967)
Genome browser
AA seq
785 aa
AA seq
DB search
MPASPSENRTRWRKRKRDSQISRRHQKHEEEDDDDDENPNAEEDLAERDYDSEDQTHHNH
PNSQPHVETEVLSDHGVQISQFPAVIKRSVNRPHSSVTAIVALERALESGENKAPSALAA
PVLENVSHGQLQALSSVPSDSFAFDGDSSFVITPPPILEGRGVVKRYGTKALVVPMHSDW
FSPATVHRLERQVVPHFFSGKSPDHTPEKYMECRNCIVALHMEDPGKRITVSDCKGLLAG
VNVEDLTRIVRFLDHWGIINYCVQMPSHESPNAVSCLREETSGEVRVPSEALKSIDSLIK
FDKPNCKLKADEIYSSLSAHSADVLDLEDRIREHLSENHCNYCSCPLPVVYYQSQKEVDI
LLCTDCFHDGRFVIGHSSIDFVRVDSTRDYGELDGDSWTDQETLLLLEAMEIYNENWNEI
AEHVGTKSKAQCILHFLRLPMEDGKLENINVPSMSLSSNAINRDHSGRLHCYSNGDTAGT
VHQTRDSDNRLPFANSGNPVMALVAFLASAVGPRVAASCAHAALAVLSEDNSGSTSQMEA
PGHDNRTNSENIHCRDGGPHGETAVSNNHNEDKAKVRGSWGLNEGRITPLSAEKVKDAAK
AGLSAAAMKAKLFADHEEREIQRLCANIVNHQLKRLELKLKQFAEIETLLMKECEQLERT
KQRCAADRSRIMSARLGTVGATPTMNASGVGPSMASNGNNRQQMISASSSQPSVSGYGNN
QPVHPHMSFAPRPSMFGLGQRLPLSMIQQSQPASSTAMFNAPSNVQPTTNHPLLRSVSGT
NSGLG
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgccagcctctccttcagagaaccgaaccagatggaggaagcgcaagagagattcgcaa
atcagccggcgccaccagaagcacgaggaggaggacgacgacgacgacgaaaaccccaat
gcggaggaagacctcgccgaacgcgactacgattcggaggaccaaacgcaccacaaccac
cctaattcgcaacctcacgtggagacggaggtcctctccgaccacggcgttcagatttcg
cagttcccggcggtgataaagcgctccgtgaaccgccctcactcctccgtcaccgcaatt
gttgctctggagcgtgccctcgagtccggagagaacaaggctccaagcgctctcgctgct
ccggttctcgaaaacgtgtctcacggccagcttcaagcgctgtcgtctgttccctctgat
agctttgctttcgacggtgattcctcttttgtcatcactccccctcccattttggaaggt
cgtggcgttgttaagcgctatggaactaaggctcttgtagttccaatgcattcagattgg
ttttcgcctgccacggtgcacaggttggagaggcaagtggtgccgcatttcttttcaggg
aagtcgccggatcatactccggagaagtacatggagtgtaggaactgcattgttgccttg
cacatggaggacccagggaagaggattacggtttctgattgcaagggtttgttggctggg
gttaatgttgaagatttgactcggattgttaggttccttgatcattggggaattattaat
tactgtgttcagatgccgagtcatgagtctcccaatgctgtgtcttgcctaagggaggag
acgagtggagaggtccgtgtaccatcggaggctttgaaatctatagacagtttgatcaaa
tttgacaagcccaactgtaaactgaaagcagacgaaatttattcgtcgttgtctgcacat
agtgccgatgtcttagatctggaggacagaataagagagcatctatcagagaatcactgc
aattattgttcttgtcctcttcctgttgtatactatcagtctcaaaaagaggttgatatt
ttactctgcactgattgctttcatgatgggagatttgtcattggtcattcaagtatagat
tttgtaagggtggattcgactagggattatggtgaactagatggggatagttggactgat
caagaaactttgctgcttcttgaagcaatggagatttacaatgagaattggaatgaaatt
gctgagcatgttggtaccaagtcaaaagcacaatgcattcttcattttctccgtctaccc
atggaagatggaaaattggaaaatattaacgttccaagcatgtctttgtcatccaatgca
ataaatagagatcatagtggaagactgcattgttactcaaatggagatactgcaggaact
gtccatcaaaccagagattctgacaatcggcttccttttgcaaattctggaaatcctgtt
atggctttggttgcctttttagcttctgcggttggaccaagagtagctgcttcttgtgct
catgcagcattagcagtattgtcagaggataattctggcagcacgtcacaaatggaagca
ccgggacatgataataggacaaattcagaaaacatacattgtcgagatggtggccctcat
ggagaaacagcagtttcaaataatcataatgaggataaggcaaaggtgcgtggttcatgg
ggtctgaatgagggtaggataaccccactctctgctgagaaagttaaagatgcggctaaa
gcaggcctttctgctgcagcaatgaaagcaaaattatttgccgatcatgaagaacgtgaa
attcagaggttatgtgctaatatagttaatcatcagctgaaaagattggaattgaagctg
aaacagtttgcagaaattgaaacattgttgatgaaagaatgcgaacaactggagagaaca
aagcaaaggtgtgctgctgatcggtcccgcataatgtcagcacgtcttggaactgtagga
gccacacccacaatgaatgcatcgggtgttggtccctcaatggctagtaatggcaacaat
aggcaacagatgatctctgcttcttcttcacagcccagcgtctcagggtatggcaacaac
caaccagttcatccacatatgtcctttgccccacgaccttcaatgtttgggttggggcaa
agattgcccctatctatgatacaacaatcacaaccagcttcttcaactgccatgttcaat
gcccctagtaatgtgcagcccactaccaatcatccattgttgaggtctgtatcgggaact
aactctggtttaggttaa
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