Glycine soja (wild soybean): 114410412
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Entry
114410412 CDS
T06057
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03030
DNA replication
gsj03410
Base excision repair
gsj03420
Nucleotide excision repair
gsj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114410412
03410 Base excision repair
114410412
03420 Nucleotide excision repair
114410412
03430 Mismatch repair
114410412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsj03032
]
114410412
03036 Chromosome and associated proteins [BR:
gsj03036
]
114410412
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114410412
DNA replication proteins [BR:
gsj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114410412
DNA Replication Termination Factors
ELG1-RFC complex
114410412
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
114410412
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114410412
Check point factors
HRAD17(Rad24)-RFC complex
114410412
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_lid_RFC1
AAA_assoc_2
AAA_22
DNAX_ATPase_lid
AAA_11
AAA_16
AAA_14
AAA_5
AAA_30
ATPase_2
nSTAND_NTPase5
AAA_7
RuvB_N
AAA_19
DUF815
ResIII
nSTAND3
bpMoxR
AAA_24
AAA_3
MCM
SLFN-g3_helicase
TniB
AAA_28
Mg_chelatase
AAA_18
AAA_2
Gp44_lid
RNA_helicase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
114410412
NCBI-ProteinID:
XP_028230154
LinkDB
All DBs
Position
4:51216074..51222894
Genome browser
AA seq
385 aa
AA seq
DB search
MQISVLNNALNEESAYYHRDLTMAETNHHMDIDSDDHTYTARPDKAKSVVVASNPPAAGK
AIPWVEKYRPLSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLY
GSQYQNMILELNASDDRGIDVVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQF
ALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLD
VEDSGLAALVRLSNGDMRKALNILQSTHMASQQITEETVYLCTGNPLPKDIEQISYWLLN
EQFADSFKRIDEMKTRKGLALVDIVREVTLFVFKIKMPSAVRVQLMNDLADIEYRLSFGC
NDKLQLGSVIASFSRARSALVAAAT
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatttcagttctcaacaacgcactgaacgaagaaagtgcgtattatcaccgtgac
ctaacaatggcggagacgaaccatcatatggacatcgacagcgacgaccacacttacacc
gcgaggcccgacaaagctaaaagtgtcgtcgtcgccagcaaccctcccgccgccggcaag
gccattccgtgggtcgaaaaatatcgccctctgtccctcgacgacgtcgccgctcatcgt
gacattgtcgataccattgatcggctgaccactgagaacagattgccccatcttctgttg
tatggccctcctggcacgggcaaaacatcaacgattctcgctgtggcacgcaaactatat
ggttcacagtaccaaaatatgattttggagctcaatgcatcagatgatagaggaattgat
gtcgtgcgacagcagattcaagattttgctagcactcagagcttatcatttggtgtcaag
tcctctgtaaaacttgtattgttggatgaagcagatgccatgacaaaggatgcccaattt
gcattacgtagagtgattgagaaatatacaaaaagcactaggtttgcacttatctgtaat
catgtaaacaagattattcctgcacttcaatcaagatgcactcggtttcggtttgcccct
cttgatgccgtccatgtcactgaaagactgaaacatgttattaaggctgaagggcttgat
gttgaagacagtggcttagcagctcttgttcggcttagcaatggtgatatgagaaaggct
ttgaatattcttcagtcaacacatatggcttctcagcagataacagaagaaactgtttac
ctgtgcactggaaatccattgcccaaagacattgagcaaatatcttactggcttctaaat
gaacaatttgcagatagctttaaaagaatagatgaaatgaagacaaggaaagggttggcc
ctggttgatattgtcagagaagtgacattgtttgtttttaagattaagatgccttcagct
gttcgagtacagttgatgaatgatttagcggatatagagtacagattaagttttgggtgc
aacgataagcttcagctcggatcggttattgcttctttttcacgtgctagatctgcactg
gttgcggctgctacatag
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