Glycine soja (wild soybean): 114410429
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Entry
114410429 CDS
T06057
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4-like isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03022
Basal transcription factors
gsj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114410429
09124 Replication and repair
03420 Nucleotide excision repair
114410429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114410429
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114410429
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114410429
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114410429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
114410429
NCBI-ProteinID:
XP_028230169
LinkDB
All DBs
Position
4:51325517..51333959
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AA seq
294 aa
AA seq
DB search
MPSAPSKLYADDVSLLVVTLDTNPFFWSTFPFPFAEFLSQVLAFLNTILLLGQLNQVIVI
ATGCNSCGYVYDSTSDKNHGSTTGTMPALYSNLLHNLDEFLARDRQLDADASHAPGIVPS
SLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGAADGPEQYVAIMNAIFSAQHSTVPID
SCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGVDF
RASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGSVFGQAQLDASAADRQRKA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgctccttccaaactctacgcagatgacgtgagcctcctcgttgtgacgcta
gacaccaaccctttcttctggagcacttttcccttccccttcgccgagttcctctctcaa
gtactcgcttttctcaacacgatcttgctcctaggccagctcaaccaggtcatcgtcatc
gccaccggatgcaactcttgcggctacgtttacgattccacttccgacaagaaccatggc
tccaccactggtacaatgcccgcgctttattccaatttacttcacaatctcgacgagttt
ctcgctagggaccggcaattagacgccgacgcctctcacgcaccgggaatcgttccttct
tcgctgttatcgggctccttgtccatggcgctttgttatatacagagagcttttcgttcg
ggaccaatgcctcctcagcctcggattttatgtttgcaaggggctgctgatggaccagaa
cagtatgtggcaatcatgaatgcaatattctctgcacagcactctacagttcctatagat
tcttgttatattggttcaaacaattctgcattcctccagcaggcttcatacataactggt
ggaatatattacaagcctccccaattggacgggctttatcaatatctttcaacagtgttt
gcaactgatttgcattctcgtgcatttttacggcttcctaaatctgtgggtgtggatttt
cgtgcctcgtgtttctgccataaacaaacaattgacatgggctatgtgtgttctgtatgc
ttatccatattctgtgagcaccatgataagtgttcaacctgtgggtctgtatttggccag
gctcaactagatgcctcagcagccgaccggcaaagaaaggcttga
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