Glycine soja (wild soybean): 114410478
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Entry
114410478 CDS
T06057
Name
(RefSeq) DNA mismatch repair protein MLH1
KO
K08734
DNA mismatch repair protein MLH1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03430
Mismatch repair
gsj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114410478
03460 Fanconi anemia pathway
114410478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114410478
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
114410478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
DUF6669
Motif
Other DBs
NCBI-GeneID:
114410478
NCBI-ProteinID:
XP_028230240
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Position
4:51796667..51811423
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AA seq
727 aa
AA seq
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MEESQNQRRMEPPKIQRLSESVVNRIAAGEVIQRPVSAVKELVENSLDAASSSVSLLIKD
GGLKLIQVSDDGHGIRFEDLPILCERHTTSKLSSFEDLQRIKSMGFRGEALASMTYVAHV
TVTTITKPQLHGYRVSYRDGVMEHQPRPCAAVKGTQIMVENLFYNMAARRKTLQNSSDDY
SKIVDLVSRFAIHHINVSFSCRKHGAVRADVHTVAMSSRLDAIKSVYGVSVARNLIEIEA
SDNDPSTSVFEMHGYMSNANYAAKKITMVLFINDRLVECSALKRAIEIVYAATLPKASKP
FIYISIVLPPENIDVNVHPTKREVSLLNQEVIIEKIQSVVESTLRSSNEARTFQEQSAGQ
SSSPRINTSKEVNLSPMPTGSRLLKVPVHKLVRTDSLDPAGRLHAYTQIMSDRHLEKSAS
LNAIRSSVRQRRNPKDSLELTSVQELLDKINSNCDPGMTDIIRHCTYVGMADDVFALLQH
NTRLYLANVVNLSKELMYQQVLSRFGHFNAIQLNDPVPLKDLIILALKEEDIDSECNDDD
SLKEKIAEMNTELLKQKAEMLEEYFGIHIDEHGNVSRLPVILDQYTPDMDHVPEFALCLG
NDVDWEDEKNCIQAVSAALGNFYAMHPLMLPNPSGEGLLFYKKRKMMDGYAEENTCDNTG
SDVIDNKVEHEMFSEAETAWAQREWSIQHVLFPSMRLFFKPPASMATDGTFVQVTSLEKL
YKIFERC
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagccagaatcagaggcgaatggagcccccaaaaattcagcggctgagcgag
tcggtggtgaaccgaatcgccgccggcgaggtcatccaacgccccgtctccgccgtgaag
gagctcgtggagaacagcctcgacgccgcctcctcctccgtcagcctcctcatcaaggat
ggcggcctcaaactcatccaagtctccgacgacggccacggaatccgttttgaggacttg
cccatactctgcgagcgccacacgacctccaagctgtcctcgtttgaggacttgcagcgc
attaagtcgatgggctttcgcggcgaggctctcgccagcatgacctacgtcgctcacgtc
accgtcaccaccattaccaaaccccaattgcacggttacagggtatcctatagagatggt
gtcatggagcaccaacccaggccatgtgctgctgttaaaggaacgcagataatggttgaa
aatctgttctataacatggctgcaaggaggaagacgctgcaaaattcttctgatgattat
tcaaagattgtagacttagtaagccggtttgctattcatcatattaatgtcagtttctcg
tgcagaaagcatggagctgttagggctgatgttcacactgtggccatgtcttcaaggctc
gatgccatcaaatctgtctatggggtctcagttgctcgcaatctgattgaaattgaagcc
tcagacaatgatccatctacttcggtttttgagatgcatggctacatgtccaatgcaaat
tatgctgcaaagaaaatcaccatggtgcttttcatcaatgatcgactggttgagtgttct
gcattgaagagggctattgaaattgtttatgcagcgacattaccaaaagcatctaagccc
tttatatatatttcaattgttttaccaccagagaatattgatgtcaatgtacatccaaca
aagagagaggtgagccttttaaatcaggaagtcatcattgagaagatacagtctgtggtt
gaatcaacattgaggagttccaacgaggcacggacatttcaagaacaatcagctgggcaa
tcttcatcgcctcgtattaatacaagtaaggaggttaacctcagccctatgccaacaggt
tcaagattattgaaagtgccggtacataagttggttagaacagattcattagatcctgct
ggaagattacatgcctacacgcaaattatgtctgatagacatcttgaaaagagtgctagt
ttgaatgcaataaggtcttcggttagacaaagaaggaacccaaaagattctttagaactc
actagtgttcaagagcttcttgacaagatcaatagcaactgtgaccctggcatgacagac
atcataaggcattgcacatatgttggaatggcagatgatgtttttgctttgcttcagcat
aatactcgtctttatcttgcaaatgttgtaaacttgagcaaagaacttatgtatcagcaa
gttcttagccgttttggccatttcaatgccattcaactaaatgatccagtccccttgaaa
gacttgattatattggctctgaaggaagaggatatagattcagaatgtaatgatgatgac
agcttaaaagagaagattgcagaaatgaacacagaattgctgaaacaaaaggcagaaatg
ctggaggagtattttggcattcatattgatgagcatggaaatgtctctagacttcctgtg
atacttgaccagtacacacctgacatggatcatgtccctgaatttgctctttgtttgggc
aatgatgttgattgggaagatgaaaagaattgcattcaagcagtttcagctgctttggga
aacttctatgctatgcatccactgatgttgcccaatccgtctggtgaaggtttgcttttt
tacaagaagagaaaaatgatggatggttatgctgaagagaatacctgtgataatactggg
agtgacgtgattgacaataaagttgagcatgaaatgttttctgaagctgagactgcatgg
gcccagcgtgaatggtcaatacaacatgtgctttttccttccatgagactctttttcaaa
ccacctgcttctatggctactgatggaacctttgttcaggtaacttcgctggagaaactg
tataagatttttgaaagatgctaa
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