Glycine soja (wild soybean): 114410480
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Entry
114410480 CDS
T06057
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsj04131
]
114410480
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsj04147
]
114410480
Membrane trafficking [BR:
gsj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
114410480
Exosome [BR:
gsj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114410480
Exosomal proteins of bladder cancer cells
114410480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
EIF3I
TPR_COPA_B
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_Aladin
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_Nup120_160
BPS1
BPL_LplA_LipB_2
Motif
Other DBs
NCBI-GeneID:
114410480
NCBI-ProteinID:
XP_028230243
LinkDB
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Position
4:complement(51815469..51821329)
Genome browser
AA seq
1206 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHKKRPWILASLHSGVIQLWDYRMGTLVDRFEEHEGPVRGVHFH
DSQPLFVSGGDDYKIKLWNYKLHRCLFSLLGHLDYVRTVQFHHESPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPRDDLLVSASLDQTLRVWDISPLRKKSPSSDDMPFG
SPDAVVKYVLEGHDRGVNWASFHPALPLIVSAADDRQLKLWRMNDTKAWEVDTLRGHMNN
VSCVLFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAAHPEMNLLAAGHD
SGMIVFKLERERPAFAVSGDALFYTRDRFLRFYEFSTQRETQVLPIRRPGSPSLNQSPRT
LSYSPSENAVLLCSDIDGGSYELYCISKDGYGRGDLQDAKKGVGVSAVFVARNRFAVLDR
SSNQVLLKNLKNEIVKKTVLPIATDAIFYAGTGNLICRSEDRVVLFDLQQRIVLGELQTP
FVKYIVWSSDMETVALLSKHAIIIANKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHI
KYCLPNGDSGIIKTLDVPIYITKVSGNTIFCLDRDGKKRAIAIDSTEYIFKLSLLKKKYD
HVMNMIKNSQLCGQAVIAYLQQKGFPEVALHFVNDERIRFNLALESGNIQIAVASATAID
EKDYWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNLEKLSKMLKIAEVKNDV
MGQFHNAMYMGDVRERVKILENVGHLPLAYITASVHGLHDVAERLAAELGNNVPSLPGGK
VPSLLMPPSPLTCGGDWPLLRVMRGLFDGGLDNMNRGAADEEYEAADADWGEELDLVDVD
DLQNGEVAAILEDGEVADENEEEGGWEMEDLELPPEADTPKAFLGTRSVFVAPTPGLPVS
QIWIQKSSLAADHAAAGNFDTAMRLLNRQLGITNFSPLRSTFLDLSTGSHSYLRAFSSAP
VISFAIERGWTESSSANVRGLPALPLRLPQLDERLRAGYKSTTAGKFTEALKAFTSILHA
IPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRREMKDNLTRQQELAAYFTHCNLQTP
HLRLALLNAMTVCFKAKNLASAANFARRLLETNPTVETQAKTARKVLAAAETNMTDAKPL
NYDFRNPFVTCGATYVPIYRGQKDVSCPYCTSRFVPSQEGQQCTVCDLAVVGADASGLLC
SPSQIR
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaaattcgagacgaagagcaaccgtgtgaagggcctgagcttccacaagaag
cgtccatggatccttgcgagcctccacagcggcgtgatccagctgtgggactaccgcatg
ggcaccctggtcgatcgcttcgaggagcacgagggccccgtccgtggcgtccacttccac
gactcccagcccctcttcgtctccggcggcgacgactacaagatcaagctgtggaactac
aagctccaccgctgcctcttcagcctcctgggccaccttgattacgtccgcaccgtccag
ttccaccacgagagcccctggatcgtctccgccagcgacgaccagaccatccgtatctgg
aactggcagtcccgcacctgcatttccgtcctcaccggccacaaccactacgtcatgtgc
gcctctttccatccccgcgacgatctcctcgtctccgcctccctcgatcagaccctccgt
gtttgggacatctcccctctcaggaagaaatccccctcctccgacgacatgccttttggc
tcccccgacgccgtcgtcaagtacgtcttggagggacacgatcggggcgtcaattgggcc
tcctttcaccccgctctccccctcatcgtctccgccgccgatgaccgccagctcaagctc
tggagaatgaacgatacgaaggcatgggaggtggatactttgagagggcacatgaataat
gtgtcatgtgttctttttcatgccaagcaggatattattgtgtccaactctgaggacaag
agtattcgggtgtgggatgcgaccaagaggactgggatccagacgtttcgcagggagcat
gatcggttttggattctggctgcacatcctgaaatgaatctgttggcggccggtcatgat
agtgggatgattgtgtttaagttggagagggaaaggcctgcgtttgctgtgagtggtgat
gctttgttctatactagggaccggtttttgaggttctatgagttttcgacacagagagag
acacaggtgctgccaattcggcggcctggatctccaagtcttaatcagagtccaaggact
ctttcttatagtccgagtgaaaatgcagttctgctctgttcagatatagatggtggatct
tatgagctgtattgcatatccaaggatggctatggcaggggtgatttgcaggatgccaag
aaaggtgttggagtatcagcagttttcgtggctcggaataggtttgctgtgcttgacaga
agcagcaaccaagtccttttgaaaaatctcaagaatgagattgttaaaaagactgttctt
cctattgccactgatgctatattctatgcaggaacgggcaacttgatttgtaggtcagag
gatagggttgtcctgtttgatcttcagcagagaattgttcttggtgaactccagacccct
tttgtcaagtatattgtctggtctagtgatatggaaactgttgctttgctcagcaaacat
gccattatcattgctaacaagaagcttgtgcaccaatgcactctccatgagaccattcgt
gtaaaaagtggagcctgggatgacaatggtgttttcatctacacgacattaaatcacatc
aaatactgccttcccaatggagatagtgggataataaagacattggatgtccccatttac
atcactaaggtttctggaaacaccatcttctgcttggatcgggatgggaagaaaagagcc
atagctattgattcgactgaatatatttttaaactctccttgttgaagaaaaaatatgac
catgtcatgaacatgataaagaattcgcagctttgtgggcaggctgtgattgcttatctc
cagcaaaaaggctttcctgaggttgccctccattttgtgaatgatgagagaatacggttc
aatttggcgttggagagtggaaacattcaaattgctgttgcgtcagctacagcgattgat
gagaaagattactggtaccgtttaggggttgaggctcttcgtcagggtaatgctgggatt
gtggagtatgcatatcagcgtaccaaaaattttgagagattatctttcctttatctcatc
acgggtaacttggagaaactttcgaagatgctgaaaattgctgaagtaaagaatgatgta
atgggccagtttcacaatgccatgtatatgggtgatgtccgagaacgggttaaaatcttg
gagaatgtgggtcatttgcctcttgcttacatcaccgcatcagtccatgggctacatgat
gttgccgaacggcttgcagctgaacttgggaacaatgttccatctttacccgggggaaaa
gtaccgtctcttttaatgccaccgtcaccgctcacatgtggtggtgattggccccttctt
agggtcatgcgaggcttatttgatggcgggcttgacaacatgaatcggggtgccgctgat
gaagaatacgaggcagctgatgctgattggggtgaggagcttgacttggttgatgtggat
gacttacaaaatggggaagttgctgcaattttggaggatggggaagtggcagatgaaaat
gaagaagagggtggatgggagatggaagatttagagctgccccctgaagctgacacccca
aaggcttttctcggtacaagatctgtttttgtggctccaacccctggcttgcctgtaagc
cagatatggattcagaaatcgtctcttgcagcagatcatgcagctgctggcaactttgat
actgcaatgcggttactgaaccgtcagcttgggataacaaacttttctcccttgagatcc
acatttcttgatcttagtactggcagtcattcctatctgcgtgcattttcatctgctccg
gtgatatcttttgccattgaaagaggttggactgagtcatcaagtgcaaatgtaagaggc
ctgccagcattgcctctcagactgccacaattggatgaaaggctcagagctggttataag
tcaacaactgccgggaaatttaccgaggctcttaaggcattcaccagtattcttcatgct
attcccttgattgtggttgagtcaaggagagaagtagatgaggtgaaggaattaatcatc
atagtcaaagaatatgttttgggtttgcagatggagttgaagagaagagaaatgaaggac
aatctaactcggcagcaggagcttgcagcttatttcactcactgcaaccttcaaacccca
catttgaggctagctttgttgaatgcaatgactgtgtgcttcaaggcaaagaaccttgcc
tcagctgctaactttgccaggaggctgcttgagaccaatcctactgttgaaacccaagcc
aagacagcaagaaaagtgcttgcagctgcagagacaaatatgactgatgccaaaccattg
aactatgatttcagaaacccatttgttacttgtggtgcaacctatgtgcccatctatcga
ggacaaaaggatgtctcttgcccttactgcacttcccgttttgtgccaagccaagaggga
cagcaatgtactgtgtgtgatcttgcagtggtcggggcagatgcttctggattgctgtgt
tcaccttcccagatacgttga
DBGET
integrated database retrieval system