Glycine soja (wild soybean): 114410482
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Entry
114410482 CDS
T06057
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114410482
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114410482
Spliceosome [BR:
gsj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114410482
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Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
IstB_IS21
FRQ
Motif
Other DBs
NCBI-GeneID:
114410482
NCBI-ProteinID:
XP_028230248
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All DBs
Position
1:complement(4042108..4049620)
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AA seq
1162 aa
AA seq
DB search
MASNTELLLQRYPFSSSFRFLPLTTTTTLSFSLLRPRSLPFPLKFHASFSFKSPTSTLRA
FSDAEEDEEDDEEDDEEEDQDHDQDNVSADEYDDVLGEASDDEADVFSPHDGFKWQRVDK
LCNEVREFGADLIDVDELASVYDFRIDKFQRQAILAFLRGFSVVVSAPTSSGKTLIAEAA
AVATVARGRRIFYTTPLKALSNQKFREFRETFGGSNVGLLTGDSAVNKDAQVLIMTTEIL
RNMLYQSVGNVSSGSGLVNVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATV
ANPDELAGWIGQIHGETELVTSSKRPVPLTWHFSLKNSLLPLLNEKGTHMNRKLSLNYLQ
LQAAVAKPYKDDWSRKRNPRKRGTLSGYDSDDNMFEQRSLSKNNINAIRRSQVPQVIDTL
WQLQSRDMLPAIWFIFSRKGCDAAVQYLENCKLLDECESSEVELALKRFRKQYPDAVRES
AVRGLLEGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSK
RGDSGRIPLSSNELLQMAGRAGRRGIDENGHVVLIQTPNEGAEEGCKVLFAGLEPLVSQF
TASYGMVLNLLAGVKAIHRSNESDNMKPSTGKTLEEARKLVEQSFGNYVSSNVMLAAKEE
INKIEKEIEFLMSEITDEAIDRKSRKALSPRQYKEIAELLEDLRAEKRVRSELRKQKEAK
RISALKPLLEEPESGHLPFLCLQYRDSEGVEHSIPAVFLGKVDSLNASKLKDMISSVDSF
ALNLADAEPSVADSELKDDLKPSYHVALGSDNTWYLFTEKWIKTVYGTGFPNVPLAEGDA
RPREIMSILLDKEDMKWDKLSHSEHGGLWFMEGSLDTWSWSLNVPVLSSLSENDELLLQS
QDYKDAIERYKEQRNKVSRLKKKIVRSEGYKEYFKIIDAVKFTEEKIKRLKNRSKRLINR
IEQIEPSGWKEFMQVSNVIHEIRALDINTHIIFPLGETAAAIRGENELWLAMVLRNKILL
ELKPAQLAAVCASLVSAGIKVRPGKNNSYIYEPSATVTKFITLLDEQRSALLAMQDKHEV
TISCCLDSQFCGMVEAWASGLTWRELMMDCAMDDGDLARLLRRTIDLLVQIPKLPDIDPL
LKHNAKAASSVMDRPPISELVG
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaacactgaactcctcctccaacgttaccctttttcttcttcttttagattt
cttcccttaacaacaaccaccactctctcattctctctccttcgccctcgatcccttcct
tttcccctcaaattccatgcctccttctccttcaagtccccgacctcaaccctccgcgcc
ttctccgacgccgaggaggacgaagaagacgatgaagaagatgatgaagaagaagaccaa
gaccatgaccaagacaacgtttctgccgacgaatacgacgacgttttgggtgaggcttcc
gacgacgaggccgacgtgttctctccgcacgatggattcaagtggcagagagtcgacaag
ctatgcaacgaagtcagggagttcggcgccgatctcatcgacgtcgacgagctcgcctcc
gtctacgacttccgcatcgacaagtttcagcggcaggcgatactggcttttctgagaggc
ttctcggtggtggtttccgctccgacgagcagcgggaagacgctgattgcggaggccgcg
gcggtggccacggtggctaggggacggagaatattctacacgacgccgctcaaggcgctg
tccaatcagaagtttcgcgagttccgcgagacttttggcggcagtaatgttggccttctc
acgggtgattctgcagtgaacaaggatgctcaggttttgattatgaccacggagatattg
cgcaacatgttgtatcagagtgttggtaatgtttcttctggaagtggacttgtaaatgtt
gatgtgattgttttggatgaagttcattaccttagtgacatatctcgtggtacagtctgg
gaggagattgttatttattgccctaaagaagttcaacttatttgcctgtcagcaactgtt
gcaaatcctgatgagttggctgggtggattggtcagattcatggtgaaacagaattggta
acatcatcaaaacgcccagttccattgacttggcatttctctctgaagaattccttatta
ccacttcttaacgagaaaggaacacacatgaacaggaaactgtcactcaattatttacaa
cttcaagctgcagtggctaaaccttacaaggatgattggtctagaaaaaggaatccccgg
aaacgaggaactctctcaggctatgatagtgatgataacatgtttgaacaacgttccctt
tcaaagaataacataaatgcaattcgtcgttcacaagttcctcaagtaattgatacatta
tggcaacttcagtccagggatatgctgccagctatttggtttatttttagcaggaagggt
tgcgatgcggctgtgcaatatcttgaaaattgcaaacttttagatgagtgtgaatcaagt
gaggttgaactagccttgaaaaggttccgcaagcagtaccctgatgctgtcagagaatca
gctgtgagaggacttttggaaggtgttgctgctcatcatgctggatgtctacctttgtgg
aaggcattcatagaagagttgtttcaaagaggacttgtcaaggttgtttttgctacagaa
accctggctgctggaatcaatatgcctgctagaacagctgttatttcatccctcagcaaa
agaggtgatagtggacgtatcccattaagctcaaatgaactgcttcagatggctgggcgt
gctggacgcagaggcattgatgaaaatggtcatgtagttctcatccaaactcctaatgaa
ggtgctgaagagggctgcaaagtactgttcgctggactagagcctctagtgtcacagttt
actgcttcatatggaatggttttgaatcttcttgctggtgtgaaagccattcataggtca
aatgaatcagataacatgaaaccttccacaggtaaaactttggaagaagctaggaaatta
gttgagcagagttttggaaattatgttagtagcaacgtaatgctggctgctaaagaagaa
attaataaaattgaaaaagaaattgagtttctgatgtcagaaattactgatgaagccata
gataggaaaagcaggaaggctttatcaccacgacaatacaaggaaattgcagaattactg
gaagatttaagggcagaaaagcgtgttcggtctgaattgcggaaacagaaggaagcaaag
agaatatctgccctgaaacctttgttggaggagcccgaaagtggacatttaccatttttg
tgcttgcagtatagagattctgaaggagttgaacattcaattcctgctgtgtttttgggg
aaggttgactcccttaatgcttcaaaactcaaagatatgatttcttctgttgattctttt
gcattgaatttagcagacgcagagccaagtgtcgctgattctgaattgaaggatgatctt
aaaccatcatatcatgtggctcttggttcagataacacatggtatctatttacagaaaag
tggattaaaacggtatatgggacaggctttcctaatgttccattggctgaaggggatgct
cgacctcgagaaattatgagtattctccttgataaggaggacatgaagtgggataagctt
tctcactccgagcatggtggtttatggttcatggaaggatctctagatacatggtcttgg
agcttgaatgttcctgttttgagtagcttgtcagaaaatgatgagctactactacagtct
caagactacaaagatgccattgaacgttacaaggaacaaagaaataaagtttcacggttg
aagaaaaagatagttcgtagtgaaggctataaagaatattttaaaatcatagatgcagtc
aagtttactgaggagaaaatcaagcgcctgaagaatagatctaaacgtttgattaatagg
atagaacaaattgagccctcgggttggaaggagtttatgcaggttagcaatgtcattcac
gaaatcagagctttagatattaatacacatatcatatttccacttggtgaaaccgctgct
gcaattcgaggagaaaatgagctatggcttgcgatggttcttcgcaataaaattttacta
gaactaaaacctgcacagcttgctgcagtgtgcgcaagtttggtgtccgcgggtatcaaa
gtccgacctgggaaaaataacagttacatttatgagccttctgcaactgtaaccaaattc
ataacgttattggatgagcaaagaagtgccttattggcaatgcaggataaacatgaggtg
acaatctcctgctgtttggatagccagttttgtggtatggttgaggcctgggcttctggg
ttgacatggagagaattaatgatggattgtgcaatggatgatggtgatttagctcgtctc
cttcgacggaccattgatctgttagttcagattccaaaattgccagatattgatccattg
ttgaagcacaatgccaaggctgcttctagtgtcatggatcggccaccaataagtgaactt
gtggggtaa
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