Glycine soja (wild soybean): 114410488
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Entry
114410488 CDS
T06057
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsj03036
]
114410488
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
114410488
REST complex
114410488
Heterochromatin formation proteins
Other heterochromatin formation proteins
114410488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
114410488
NCBI-ProteinID:
XP_028230261
LinkDB
All DBs
Position
1:complement(4054316..4066655)
Genome browser
AA seq
1429 aa
AA seq
DB search
MKRSRDEVLTSCSQLKRPVLSSRGEASGQPQMMNGGAQKLTTNDALAYLKAVKDIFQDKR
DKYDDFLEVMKDFKAQRIDTVGVIARVKELFKGHRDLILGFNTFLPKGYEITLPSEDDQP
APKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEDKSITEVYQEVAAIFQDH
PDLLDEFTHFLPDASAAASTHYASARNSMLRDRSSAMPTIRQLHVEKRERTIVSHGDHDP
SVDRPDPDHDRGLLRIEKERRRVEKEKERREDRDKRERERDDRDYEHDGARDRERFSHKR
NRKAEDSGAEPLLDADENFGVRPMSSTCDDKNSLKSMYSQEFAFCEKVKEKLRNPDDYQE
FLKCLHIYSREIITRHELQSLVGDLLGKYPDLMEGFNEFLLQSEKNDGGFLAGVMNKKSL
WNDGHGLKQIKVEDKDRDQDRDRDRYRDDGMKERDREFRERDKSTAIANKDVLGSKMSLY
PSKEKYLSKPINELDLSNCDQCTPSYRLLPKNYPIPVASQKTELGAEVLNDYWVSVTSGS
EDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLDKINSNIIKGDSPIR
IEEHLTAINLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRLKQKQEEWARCRADFSKV
WGEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKEISEKKRKDDVLLAIAAGNRRP
ILPNLEFKYSDPDIHEDLYQLIKYSCGEICTTEHVDKVMKVWTTFLEPMLCIPSRPQCAE
DTEDVVKVKNNCVLNDTATVAESDCSPVVGATIMNPKHINVSRNGDECMPLDQSTSSKAW
QSNGDSGVEDRYLDDHALRKTETLGSNTQHGKMNSIAFTPDEPSGFNNKQDQSSERLVNA
NVSPASGMEQSNGRTNIDNLSGLTATPTRPGNASVEGGLDIPSSEGGDSTRLGTSTNGAI
TGGTKVHRYQEESVRPFKNEREEGELSPNGDFEEDNFAFYGGNGLDAVHKGKDGGVSRQY
QNRHGEEVCGETRGENDADADDEGEESHHRSSEDSENASENVDVSGSESADGEECSREEH
EDGEHDNKAESEGEAEGIADAHDVEGDGMSLPYSERFLLTVKPLAKHVPPMLHEKDRNSR
VFYGNDSFYVLLRLHQTLYERIQSAKINSSSADRKWKASSDTSSTDQYDRFMNALYSLLD
GSSDNTKFEDDCRAIIGIQSYVLFTLDKLIYKLVKQLQAVAADEMDNKLLQLYAYEKSRK
PGKFVDIVYHENARVLLHDENIYRIEYSPGPMKLSIQLMDSGHDKPEVTAVSMDPNFSTY
LHYDFLSVVSDKKQKSGIFLKRNKRRYASNDEFSSQAMEGLQIINGLECKIACSSSKVSY
VLDTEDFLFRIRRKRRALRLKSSGAHEQAQSSNICSSRVQRFRNLFSIT
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtccagagatgaagttctcacgagttgttctcaattgaaacggcctgtgttg
tcttcacgaggagaagcgtctgggcaaccgcagatgatgaatggaggtgctcagaaactg
acaactaatgatgcccttgcatatctcaaggcagtgaaggatatatttcaagataagagg
gacaagtatgatgactttttggaggttatgaaagatttcaaggctcaaagaattgatact
gtgggtgtcattgcaagagtgaaggaactgtttaaaggccacagagatcttatattggga
tttaacaccttcttgcctaagggttacgaaatcacacttccatcagaggatgatcaacct
gccccaaagaaacccgttgaatttgaagaggctataaattttgtgaacaagataaagact
cgttttcaaggtgatgatcatgtgtataaatcatttcttgacatattgaatatgtacaga
aaggaagacaaatctattactgaggtctaccaggaggttgctgctatttttcaggaccac
cctgatcttcttgatgagtttactcattttcttccagacgcttctgcagctgcctctact
cattatgcttctgctcggaattctatgcttcgcgataggagctctgcaatgccaacaata
cgacaattgcacgttgaaaagcgagaacggaccattgtttcacatggtgatcatgacccc
agtgttgatcgtcctgacccagatcatgacaggggtttgttaaggatagaaaaggagagg
agacgtgtggagaaggaaaaggaacgtagagaagatagagacaagagagaacgtgaaagg
gatgatagagattatgagcatgatggggctcgagatagggagcgattctctcacaaacgg
aatcgtaaggctgaagactctggagctgaaccattgcttgatgcagatgaaaattttggt
gtgcgtcctatgtcatccacttgtgatgataaaaattctctgaaaagtatgtacagtcaa
gagtttgctttctgtgaaaaggtcaaagaaaaattacgaaatcctgatgactaccaggaa
tttttgaagtgcttgcatatctacagcagggaaataattacccgacatgagttgcagtca
ttggtgggtgatttactgggaaaatatccagatcttatggaggggtttaatgaatttttg
cttcaatctgaaaagaatgatggtggattccttgctggtgttatgaataaaaagtcctta
tggaatgatggacatggactgaaacaaataaaggttgaagacaaggatagagatcaggat
agagatagagaccgttatagggatgatgggatgaaagaaagggaccgtgaattccgagaa
agggacaaatctactgcgattgccaacaaggatgttttaggttctaagatgtctctatat
cccagcaaggagaagtatttatccaaacctataaatgagctggacctttctaactgcgac
cagtgcactcctagttaccgtctcttaccgaaaaattacccaatacctgtagctagccag
aaaacagaacttggtgctgaggtgttgaatgattactgggtgtctgtcacttcaggaagt
gaggattattccttcaaacatatgcgcaaaaatcagtatgaagagagtttgtttagatgt
gaagatgacaggtttgaacttgacatgttgttagagtctgtaaatgtgacaaccaaacga
gtagaagagctgttagacaagatcaatagtaatataattaaaggagacagcccaattcgt
attgaggagcacttaacagctataaacctgaggtgtattgagcgattatatggtgaccat
gggcttgatgtgatggaagtgttaaggaagaatgcacctctagctttgccagtgatatta
acacgcttgaagcagaaacaggaagagtgggcaaggtgccgtgctgattttagtaaagtt
tggggtgaaatatatgctaagaactatcacaaatctcttgatcatcgtagcttctacttt
aagcaacaggatactaaaagcttgagcaccaaagccttgctggcagaaatcaaagaaatc
agtgaaaagaaacgcaaagatgatgttcttcttgctattgctgctggaaataggcggcca
attcttccaaacttggagtttaagtattctgatccagatattcatgaagatttatatcag
ctcataaaatattcctgtggagaaatttgcacaactgaacacgtggataaagttatgaag
gtttggacaacatttttagaacccatgctttgtattccttctcggccccagtgtgcagag
gatacagaagatgttgtcaaggttaagaataattgtgtcctaaatgacacagcaactgtt
gctgagagtgactgtagccctgttgtgggtgctaccataatgaatccaaagcatataaat
gtttccagaaatggggatgagtgtatgccattagatcaatcaacttctagtaaagcatgg
cagtcaaatggtgatagtggggttgaggataggtatcttgatgaccatgcattgcgtaaa
actgaaactttgggcagcaatacacagcatggtaaaatgaatagtattgcattcacacct
gatgaaccatcaggatttaacaataagcaagaccagtccagcgaacggttagtgaatgca
aatgtctcaccagcatctggaatggagcaaagcaatggaaggacaaacatagataatttg
tcgggactcactgccactccaacaagacctggtaatgcttctgttgagggaggacttgat
ataccgtcatcagagggtggtgattctacaagactgggtacatcaacaaatggggccatc
actggaggcaccaaagttcaccgataccaagaggaatcagttcgacccttcaaaaatgaa
agagaagagggtgagttatctcctaatggagactttgaagaagataactttgcattttat
ggaggtaatggtttggatgcagtgcataaaggaaaagatggtggtgtgagtcggcaatac
caaaataggcacggggaagaagtttgtggtgaaactagaggagaaaacgatgctgatgct
gatgatgaaggtgaagaaagccatcacaggtcatcagaggacagtgaaaatgcatctgaa
aatgttgatgtttctggaagcgagtctgctgatggtgaggagtgttctcgagaagagcac
gaggatggggaacatgataacaaggctgagagtgaaggtgaagctgaaggaatagctgat
gcccatgatgttgaaggagatggaatgtcattgccatattctgaacgctttctactaact
gtgaagcctctagcaaagcatgttcctccaatgttacatgagaaggacaggaattcacga
gttttctatggaaatgattccttttatgtgttgcttagacttcatcagacattgtatgag
aggatacaatcagcaaagataaactcatcatctgctgataggaaatggaaggcttcaagt
gatacaagctccactgatcaatatgacaggttcatgaatgccctttacagtttgctggat
ggttcttctgataatacaaaatttgaggatgattgtcgagctataattggaattcaatca
tatgtcttattcacattagacaagctgatatataaacttgttaaacagcttcaagctgtt
gccgctgatgagatggataataagcttttacaactatatgcatatgagaaatcgagaaaa
cccggaaaatttgttgacatcgtttatcacgaaaatgcccgtgttcttctccatgacgag
aacatatatcgtattgaatattcacctggaccaatgaaactgtctattcaactgatggac
tctggacatgataaacctgaggtgactgctgtgtcaatggaccctaatttttcaacctat
ctacactatgacttcctgtctgtcgtctctgacaaaaaacagaagtcaggaattttcttg
aagaggaataaacgtagatatgccagtaatgatgaattttcaagccaggctatggaagga
ctacaaattattaatggtctggagtgtaagatagcttgcagttcatctaaggtctcatat
gttttagataccgaagactttttgtttcggataagaaggaaaagaagagccttgcgtctg
aagagttcaggtgctcacgaacaggcacagtcttcaaacatttgttcaagcagagtacaa
cgattccgcaatttgttttccattacatga
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