Glycine soja (wild soybean): 114410807
Help
Entry
114410807 CDS
T06057
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114410807
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
114410807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
DUF4143
HTH_AsnC-type
HTH_24
AKAP28
Motif
Other DBs
NCBI-GeneID:
114410807
NCBI-ProteinID:
XP_028230532
LinkDB
All DBs
Position
1:complement(4684880..4686842)
Genome browser
AA seq
536 aa
AA seq
DB search
MSKSPPCTYCGRASFIRDDISGELICSSCGGVQQFDQFDAQIGGIDGPQGTFIHVGTAGS
GSLYSYRERKLFAAQNLIDEVTNQLGLSSKSGDVRSMISTITEGEFGQGEWFHVLIGACA
YVVMRKEDRPLPMAEVASAIGCDVYEIGRMILRVVDFLNLRPDFPEFDIVHLLERTIRNC
NGFASVERDLIERMRKQGVFLIQCAVKWYLSTGRRPVPLVVAVLVFVAELNGVGVGMEEL
AKEVHAKVSTCRARYKELLETLVKVAQVLPWGKDVTVKNIVKNAPIVIQYMERKAMLKPG
KKREGLDRAAVDLEDVVAECLRNDGEFEYGVDGMTKRKDSQYFSLESNAGRVGGGDSDGL
QISPECLSLLYKKFLDENCCIESLRGSGNAQKRRVLRFDLLECREWWDGKSELSKKLLLN
RLLEKDVGVDTMPPSFVNGQLKCEMRRERINAAKVRIKRIMHPSDADLGDAEIPCPLDSS
YPERRRKKRKGMVVDDVDWEDLIIETLVLHRVKEEEIEKGHYNTLLDLHVFNSGIV
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatctcctccctgtacctactgcggccgagcctccttcatccgtgatgatatc
tccggcgagttaatctgctcctcgtgcggcggcgtccagcaattcgaccaattcgacgcc
caaattggcggcatcgacggtcctcagggaaccttcatccatgtcggcaccgctggttca
ggtagcctctactcctaccgcgagagaaaactcttcgcggcgcaaaacctaatcgacgaa
gtaaccaaccagttagggttatcttccaagagcggcgacgtgagaagcatgatatccacc
atcaccgagggcgagttcggacagggcgagtggttccacgtgctcatcggcgcgtgcgcg
tatgttgtcatgcgaaaagaggatcgacccttgcccatggcggaagtcgcctccgcgata
gggtgtgatgtttacgaaatcgggagaatgattttacgcgttgttgattttttgaatctg
aggcctgattttcctgagtttgatattgtgcatttgctggaacggacgattaggaattgt
aacggttttgcctctgttgagagggatttgattgagaggatgaggaagcagggggtattt
ttgattcagtgtgcggtgaagtggtatctaagcaccgggcggcggccagtgccgttggtg
gtggcggtgttggttttcgtggcagagttgaatggggttggggtggggatggaagaatta
gctaaggaggttcatgctaaggtttccacatgtagggctaggtataaagagttgcttgag
acacttgtgaaggttgcacaggtgttgccttgggggaaggatgttaccgtgaagaacatt
gttaagaatgcaccgattgtgattcagtatatggagaggaaggctatgttgaagcctggg
aagaagagggagggtcttgatcgggctgcggtggatttggaggatgtggttgctgaatgc
ttgagaaatgatggtgaatttgaatatggggttgatggcatgactaaaaggaaggattca
cagtatttttcgttggagagtaatgctggtagagtgggtggtggggattctgatgggctg
cagatttcgcctgaatgcttgtcattgctgtataagaagtttttggatgaaaattgttgt
attgagtctctgagagggagtgggaatgctcagaaaaggagggttttacggtttgatctg
ctagagtgtagggagtggtgggatgggaaatctgaactgagcaagaagcttctgcttaat
cgtttattggagaaggatgttggagtggataccatgccaccatcgtttgtcaatggtcaa
ttgaaatgtgaaatgaggagggaaaggatcaatgctgctaaggttcgaataaaaagaatt
atgcatccgtcagatgctgatctgggtgatgctgagattccttgccctttagatagctct
tatcctgaaagaagaaggaagaagagaaaaggaatggtagttgatgatgttgattgggaa
gacttaattattgaaacccttgttcttcatcgagtgaaagaagaggaaattgagaaggga
cattacaataccttactggatctacatgtgtttaactctggcattgtatga
DBGET
integrated database retrieval system
