Glycine soja (wild soybean): 114410912
Help
Entry
114410912 CDS
T06057
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114410912
Spliceosome [BR:
gsj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
114410912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
114410912
NCBI-ProteinID:
XP_028230612
LinkDB
All DBs
Position
4:complement(50259230..50268795)
Genome browser
AA seq
821 aa
AA seq
DB search
MVKLASARVFRTYGPGLAKNRYEYINAALYLIASLVLLSGLAAQLSSEARSGLVLIIAAL
AIILLVNLHDLFAHLVGIDFRLPLIAFDLQLAFVEFAVPVIQMFGTLLAFLGVFFLFIQE
EKGYGYFKLEKHALNMLVAGPVLWVIGSIHNSCQIYERADGHVQILQQCVYIPFLMGSLS
FMLSAILNYHEKSRDIHHGLHLLGGTWIWLGIFGSLMFFIGGLTNLIKVFKMQQMNGIRL
EKLRGEAHERLLSAREAQIPLIMEHQTNISHQPQETKVTLPLPTPYKDVLIGQTNVEISN
IFFNKNEKSHLYKYVVTIQRVKALSLPAVLLLITEKLLLYRFPFLRTPIPLTRKKKKKPE
PFSSSQFSQSKGLQIFWFFSTDFESLFEMASVSSQPQFRYTQPPSKVLHLRNLPWECTEE
ELIELGKPFGKVVNTKCNVGANRNQAFIEFADLNQAIAMISYYASSSEPAQVRGKTVYLQ
YSNRQEIVNNKTAADVPGNVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGF
QALVQFSDAETATSAKDALDGRSIPRYLLPEHMGPCTLRITYSGHSDLSVKFQSHRSRDY
TNPYLPVAPSAVEGSGQAMVGLDGKRLEAESNVLLASIENMQYAVTLDVLHMVFSAFGPV
QKIAMFDKNGGLQALIQFPDTQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN
DRSRDYTIPNTPAVNVQPSILGQQSVPMMGPPQQPYNGSQAGWGTAPPATTVQSMPMQMH
NNVYMPSGTMPQQMAPGMQFPSYNTAQPTTTLPSYRSDRTQ
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctagcttccgcaagggtcttccgcacctacggcccgggcctggccaagaac
cgctacgagtacatcaacgccgccctctatctcattgcctccctcgtccttctgtcgggc
ctggcggcccagctttcttccgaagcccgatccggcctggtgcttatcatcgccgccttg
gccatcatcctcctcgtcaacctccatgacctcttcgcccacctcgtcggcatcgatttc
cggttgcccttgatcgccttcgaccttcaactcgccttcgtcgagttcgcggtccctgtc
attcagatgttcggaacgcttcttgcctttctaggcgtcttcttcctttttattcaggaa
gagaaaggatatgggtacttcaaattggaaaagcatgctctgaacatgctggttgctggt
cctgtattgtgggtgataggatcgattcataattcgtgccaaatttatgagagagcggat
ggtcatgtgcaaatcttgcagcagtgtgtgtatattccatttttgatggggagtttgtca
ttcatgcttagtgcaattctcaattatcacgagaaatctagagatatccaccatggcctt
cacttacttggtggtacttggatctggctaggcatctttggaagcctaatgttctttatt
ggtggattgacaaacttaatcaaagtgttcaagatgcaacaaatgaatggaattaggctg
gagaaactgcgaggtgaagcacatgaacgactgctgagtgcgagagaagcacagattccc
ctgatcatggaacatcaaacaaatataagccatcaacctcaagagaccaaagttacttta
cctcttcctactccttacaaggatgtccttattggtcagactaacgttgaaatttctaat
attttttttaataaaaatgaaaaatctcacctatataaatatgtggttacgatccagcgt
gtaaaggccttgtctttgcccgcggtgctcctgttgataacggagaagctccttctttat
cgtttcccttttttgagaaccccaatcccgttaactcgtaaaaaaaaaaaaaaaccagag
cccttctcgtcctctcaattctctcagtccaaggggctgcaaattttctggttcttttcg
acagattttgagtcattgtttgaaatggcatcggtatctagtcagccacagttccgttac
actcagccgccgtcaaaggtgcttcatttgaggaacttgccgtgggagtgcacagaggag
gaactgattgagcttgggaagccgtttggcaaagttgttaacacaaaatgcaatgttggg
gcaaatagaaatcaagcttttattgaatttgcagatttgaatcaagccattgcaatgata
tcatactatgcctcatcatcagagcctgctcaagtacgagggaaaactgtatacctacaa
tattcaaataggcaagaaatagtgaataacaaaactgctgcagatgttcctgggaatgta
ttgttggtaacgattgagggtgcagatgcacgtcttgtcagcattgatgtcttgcacttg
gttttttcagcctttggatttgtgcataagattactactttcgagaagacagcaggattt
caggcactggtgcaattctcagatgcagagactgccacctctgcgaaggatgctttggat
ggaagaagcatacctaggtatctgctgcctgagcatatgggaccatgtacccttaggatc
acttattctggacattcagatttaagtgtaaagtttcaaagccacaggagcagagactat
actaatccttaccttcctgttgctccatcagctgtggagggaagtggacaggctatggtt
ggcttggatgggaaaagactggaggctgagagtaatgttctccttgcatctattgaaaac
atgcaatatgccgtaacactggatgtcttacacatggttttctctgcttttggtcctgtc
caaaaaattgcaatgttcgataagaatggtggtttgcaggctctgattcaatttccagat
actcagacagctgttgtggccaaggaggccttggaaggacattgcatatatgatggaggt
ttttgcaagcttcacatttcatattcacgacatactgatctaagtataaaggtcaataat
gataggagcagagactataccattcctaatacccctgctgtgaacgtccaaccctcaatt
ttagggcaacaatctgttcccatgatgggccctccacaacaaccatacaatgggtctcag
gctggatgggggacagctccaccagcaacaacggttcagtctatgccaatgcagatgcac
aataatgtttacatgccatctggaactatgccacaacaaatggcccctggaatgcaattt
ccaagttacaacacagcacaacctacaacaacattgccctcatatcgatctgatcgtact
caatag
DBGET
integrated database retrieval system
