KEGG   Glycine soja (wild soybean): 114411622
Entry
114411622         CDS       T06057                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
gsj  Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gsj04812]
    114411622
Cytoskeleton proteins [BR:gsj04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     114411622
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Katanin_con80 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_EIPR1 eIF2A Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_IP5PC_F Beta-prop_DCAF12 Beta-prop_RIG_1st Beta-prop_ACSF4 Beta-prop_NWD2_C PROPPIN PAN2_N VPS8_N DUF5617 zf-XS
Other DBs
NCBI-GeneID: 114411622
NCBI-ProteinID: XP_028231045
LinkDB
Position
5:42538..65140
AA seq 759 aa
MTTKRAYKLQEFVAHASTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSS
GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTSHRSNCTSVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKCHEGQVQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSAGPETTGVRSLTFSPDGR
TLLCGLHESLKVFSWEPIRCHDMVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR
IEPYALNNVNHLNGHSETKSSSGNMTVLNEITAKARLSVSQNPDQLLKEIRSLGRLSVSQ
DSDSLKEGKCLASTGSAPSTPQRINLNSGPKAVPGGSTTVLNTTAQKRSSLKSHTASSVP
LINKSDIIPIIVPRTSMRSEPVADSRKEVGVSGRTMPFPLQSKAEDIHKFPNNRDDVDKP
LSPVNESAASKGIELSGFADKNNFPVSVSSMQDEARGLKVNRDVCSVEVQKGGRMRSLLN
LEKRERSLNYEGPRQGISHGRISSVHVLPFSGRAHSISTEKATISATDEDSIADVMEQHD
EFLSSMLARSAKLQMVFRCWERNDVKEVIGIMAKMDDHAVIADVVSIIMEKIDIITLEIC
AGLLPLLTDLLQSEMERHLGISLEMLLKLVRIFGSVIYSTVSATQPVGVDIEAENRLERC
NLCFTELEKVKRFLPSLSRRGGSIAKSAQELNLALQDVL
NT seq 2280 nt   +upstreamnt  +downstreamnt
atgactaccaaacgcgcttacaagcttcaggaatttgtagcacatgcttctaccgtcaat
tgcctcaagattggacggaaatcatccagggttcttgtcactggaggtgaagatcacaag
gtcaatctttgggctattggcaaacctaatgccatactgagcctgtcaggacattcaagt
ggaatagattctgtaagctttgattcctctgaagtgttggtagctgctggagctgcgagt
ggtaccatcaaactttgggacttagaagaggcaaagattgttcgtactcttaccagtcat
aggtccaattgtacatcagtggacttccatccttttggagagttctttgcatctggttct
ttagatactaatcttaagatatgggacatcagaaagaagggttgtatccatacttacaaa
ggccacactcgaggggtaaatgcaattaggtttaccccagatgggcgctgggttgtttct
ggtggagaggacaatactgtaaagttatgggatctgactgcggggaaactcttgcatgat
tttaaatgtcacgagggccaggtccaatgtatagattttcatcccaatgagtttctacta
gcaacaggctcagcagatagaacagttaaattctgggacctcgaaacctttgagcttatt
ggttcagctggtcctgagacaacgggagtgcgttctcttacttttagtcctgatgggagg
accctgctttgtggtttacatgagagtttgaaggttttctcttgggaacctataagatgc
catgatatggtggatgtgggttggtctagattgtcagatcttaatgttcatgaaggaaaa
cttcttggttgctcatacaatcaaagctgtgttggagtctgggttgtggacatctcgcgt
atagaaccatatgcacttaataatgtgaaccatctaaatggccattcagaaactaaatct
tcaagtggaaatatgactgtactgaatgagatcactgctaaggctaggctatctgtttca
caaaatccagatcaattactaaaagaaataaggtctcttggaaggttgtccgtttctcaa
gattcagactccttaaaggaggggaaatgtttggcatccacaggaagtgcaccaagtact
cctcaaaggatcaatttgaactctggtcccaaagcagtacccggtggttcaacaacagtg
cttaatacaacagctcagaaaaggagttctttgaaatctcatacagcatccagtgttcca
cttatcaataaatcagatattatacccataattgtccccagaactagcatgagatctgag
cctgtagctgattctagaaaagaagttggtgtttctggaagaacaatgccattccccttg
cagtcaaaggcagaagatatacataaatttccaaacaacagagatgatgtggataagccc
ctctctcctgtaaacgaatctgcagcttctaagggtattgaattaagtggttttgcagat
aaaaataatttccctgtttctgtcagctcaatgcaagatgaagctcgaggcctgaaagtg
aacagagatgtatgttctgtcgaagtacaaaaaggagggagaatgcgatcacttctcaat
ttagaaaagagggaacgatctcttaattatgagggacctagacaagggatttctcatgga
aggatatcatcagttcatgtgctccctttcagtgggagagcacattctatatcaactgaa
aaggctacaatttctgctaccgatgaagattccattgccgatgtgatggaacagcatgat
gaatttctcagttcaatgctggctcgttcagctaagttacagatggtcttcagatgttgg
gaaagaaatgatgttaaggaggtcattggcataatggcaaagatggatgatcatgctgtg
attgctgatgttgttagcattataatggaaaaaattgatatcattacacttgagatatgt
gctggtcttctgccacttctaaccgatcttctacaaagtgaaatggaaagacatcttgga
atatccttggaaatgctattgaaactggtcagaatatttggttcagtaatctattcaact
gtatcagctacacaacctgttggtgtcgatatcgaggcagagaacaggctagagcgttgc
aacctctgcttcacggagcttgaaaaagtcaaacgttttttaccttctctctcaagaaga
ggaggatcaattgcaaaatctgcacaagagttgaatctggctttgcaggatgttttgtga

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