Glycine soja (wild soybean): 114411667
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Entry
114411667 CDS
T06057
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114411667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114411667
03009 Ribosome biogenesis [BR:
gsj03009
]
114411667
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114411667
Spliceosome [BR:
gsj03041
]
Complex A
U1 snRNP components
U1 related factors
114411667
Complex B
114411667
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
Helicases
114411667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114411667
NCBI-ProteinID:
XP_028231117
LinkDB
All DBs
Position
5:complement(467483..472813)
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AA seq
775 aa
AA seq
DB search
MAATATASSMGPRYAPADPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSSSSTAQPK
SSSVPNSSVQVQQSSQGSQCGHSPDFSDRYDRNGSGGSNEAGSRNNQKSSKGGSYASHDV
SNGTHVAGNVDSSVRGHGASDAGAGLSPESYRHRHEISVTGDNVPPPLASFGSTGFPSEL
LREVQNAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLVPAFIHLKRSGNNSKM
GPTALVLSPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGPQLRDIDRGADIVVATPG
RLNDILEMRRISLNQVSYLVLDEADRMLDMGFEPQIRKIVNEVPNRRQTLMFTATWPKEV
RKIAADLLVKPVQVNIGNVDELVANKSITQHVEVLPPMEKQRRLEHILRSQDSGSKIIIF
CSTKKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLNQFRTGRSPVLVATDVAARGLDIK
DIRVVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDHDAKYASDLIKVLEGANQKVP
PELRDMSSRSGGGMGRSRRWGSGGRGGDSGYGGRNNDSGYGGRGNDAGYGGRGSDSNYGG
RGTSASGRGGGRGFDYESQRNDRDRSPDKGSSWSDRFKSVNRDRSRSPNRAALPQHSQGG
SFHKAMMERGGWDSDRNKSFNRDRSRSPSPHRQVKGPAVREHSPVYSFHRSMMGRGQSSP
SSQRQRACSPHRNSTPSQGDGRHGGSHSSYNGEVEEGMIPEEEGMIGQDDPVNVD
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacagcaactgcatcttcgatgggtccgcgctatgcaccagcagacccgaca
ctccctaaaccatggcgaggtcttgtggatggcaagactgggtatctttacttttggaat
cctgagactaatgtcacccagtatgagaggccctcctcaagctcaactgcccagccaaag
tcttcttcagtgcccaattcttctgtccaggttcaacaatcgtctcaagggtcgcaatgt
ggtcatagtcctgatttcagtgataggtatgatagaaatggcagtggtgggtctaacgaa
gctggatcacggaataatcagaagagttccaaagggggaagttatgcttctcatgatgtt
tcaaatggaacacatgttgctggcaatgttgattcttctgtcagaggtcatggggcttcg
gatgctggagctggactatctcctgagtcttatcgacatcggcatgaaatatctgtgact
ggagacaatgtacctccaccccttgcatcatttgggtcaactggctttccatctgagctt
ctgagagaggtacaaaatgctgggttctcagccccaactccaattcaggcacagtcatgg
cccattgctcttcaaggtagagatatagttgccattgctaaaacaggctcagggaaaacc
ttggggtatttagttccggcatttattcacctcaagcgctctggcaataactccaaaatg
ggccccactgcattggtactttcaccaacaagggagttggcaacacagatacaagatgaa
gctgtgaaatttgggaaatcatctagaatttcatgtgcttgtttgtatggaggagcacca
aagggtcctcaactgagagacattgatcgtggagcagatattgtggtagccactcctggt
cgcttgaatgatattcttgagatgagaagaattagtcttaatcaggtttcttacctggtg
ctagatgaggcagacaggatgctggatatgggttttgaacctcaaattaggaaaattgtg
aatgaggtgcctaatcgcaggcaaactctaatgtttactgcaacatggccaaaggaggtt
aggaaaattgcagctgatctgctagtcaagcctgtacaggtgaacattgggaatgtagat
gagcttgttgctaataagtccattactcagcatgttgaagtattgccaccaatggagaaa
caaagacggctggaacatattttgcggtcacaggattcaggatcaaagataattattttt
tgttctaccaagaaaatgtgtgatcaacttgctcgtaatctgacacgtcagtttggagct
gctgctattcatggggataaatcccaggctgagagggatcatgtgttgaatcagtttcga
actgggaggtctcctgtgcttgtggccacagatgttgctgcccggggactggatatcaag
gacattagggtggttgtcaattatgacttccctacaggagtggaagattatgttcatagg
attggaaggactggaagagctggagccactgggctagcttacactttctttggtgaccat
gatgctaaatatgcttcagatctcatcaaagttttggaaggtgcaaaccagaaggtgcct
ccagaacttcgtgatatgtcatcacggagtggtggtgggatgggcagatccagacgatgg
ggttctggtggacgaggtggtgattctggatatggtggaaggaataatgactctggatat
ggtggaaggggtaatgatgcgggatacggtggacgaggtagtgattcaaattatggaggg
aggggtacttctgcttctggcagaggtggaggccgtgggtttgactatgagtcccagagg
aatgatagggatcggagcccagacaagggatcaagttggagtgatcgcttcaaaagcgtc
aaccgggatcgcagtcgtagtcctaacagggccgcattacctcaacattcccaaggtggc
agctttcacaaggcaatgatggaacgtggtggatgggatagtgatcgcaacaagagcttt
aaccgggaccgaagccgcagtcctagccctcatagacaggtgaagggcccagcagttcgc
gaacattccccagtttacagttttcatcgatcaatgatgggacgaggtcaatcatctccg
tcatctcaacggcagcgtgcatgcagtcctcaccgaaactcaaccccctcccagggtgat
ggaagacatggtggatctcattcatcttacaatggagaagtggaggaagggatgattccc
gaggaagaaggaatgataggtcaagatgatcctgtaaatgtggattag
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