Glycine soja (wild soybean): 114411736
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Entry
114411736 CDS
T06057
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114411736
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gsj01002
]
114411736
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114411736
03036 Chromosome and associated proteins [BR:
gsj03036
]
114411736
Peptidases and inhibitors [BR:
gsj01002
]
Metallo peptidases
Family M1
114411736
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114411736
Coactivators
SAGA/TFTC/STAGA complex
114411736
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
114411736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
OAM_alpha
Motif
Other DBs
NCBI-GeneID:
114411736
NCBI-ProteinID:
XP_028231213
LinkDB
All DBs
Position
5:complement(1247692..1267048)
Genome browser
AA seq
1388 aa
AA seq
DB search
MAKPRKPKNNEDPKPENSGAVVHHQKLCLSIDIDKRQVHGYTELEIAVPEIGIVGLHAEN
LGIESVWVDGEPTEFEYYPHRQQQAEDDKRFSSVCSPSSAADAAVSVYMSALEKELVPNL
LINCCKPSKAESEQQQERQPASENGFHSSAEPKQNVRTVRIDYWIEKAETGIHFRNNLLH
TDNQIRRARCWFPCIDDNSQRCCYDLEFTVAHNLVAVSTGSLLYQVLSKDNPPRKTYFYK
LDVPVAARWISLAVAPFEVFPDHQFSLISHMCSPPNLSKMRNTVDFFHSAFSCYKDFLSV
DFPFDSYTQVFIEPEMAVSSLSLGASMSIFSSQVLFDEKVIDQTIDTRVKLAYALARQWF
GVYITPEAPNDEWLLDGLAGFLTDFFIKKHLGNNEARYRRYKENCAVCKVDNDGATALSC
SASCKDLYGTQCIGLYGKIRSWKSVAVLQMLEKQMGPESFRRILQTIVSRAQDKTRSIKT
LSTKEFRHFANKVGNLERPFLKDFFPRWVSSCGCPVLRMGFSYNKRKNMVELAVLRGCTT
LQTSSTSILDINPDTETRDGDIGWPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHS
KLAARRFQKPKKGLKLDGSDDNGDVPSMDMRLNTESPLLWIRADPDMEYLAEVHFNQPVQ
MWINQLEKDKDVIAQAQAIAALEASPQLSFSIVNALNNFLSDSKAFWRVRIEAAFALANS
ASEETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFQDFAEYFVLEAIPHAVAMVRAADKKS
PREAIEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILLLSSLLKRIDRLLQ
FDSLMPSYNGILTISCIRTLTQIALKLSGFIPLDRVYELVKPFRDLKALWQVQIEASKAL
LDLEFHCKGMDSALLLFIKYIEEEHSLRGQLKLATHVMRLCQMRDGLNSNDEITSQTLVS
MLNLLEGRIAFNNVSLRHYLFCILQILARRPPTLHGIPRGNRMLHMSLAEACNYQKNIFA
LDSESKPLDLPSSTKNLTQNLGPTMEGLRDAVDEAPKDQPCEASTQVHLEALKEASLEKP
KEVFTEFPQEAPIEAPNPNEVSKEVDTVSNSHERKRPIKIKVKQSSATSRADTDNQVVEC
SLGGRNEMDHGASSSVSVDAPQRNFAETVSISNHNIDEVNSWHDRGSRMTASIGSAKFLS
DGDELVKELQCTADSSIVYSQPQPEDPSSSSIIQDNNIDADARRYASLQTLSVARFDPDG
ESLGKEISARGKEKHKSKEKKRKQESNKGHHDDVEYLERKRLKKEKKHREKELAKLQSDE
AKRSSIDLSSKKVEPVVDVARQVKSVEPSGYNSKVEIKKIDTKPEPSEGTSGAPKIRIKI
KNRMLSKS
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcctcgcaagcccaagaacaacgaagaccccaagcccgaaaactccggcgcc
gtagttcaccaccaaaagctatgcctctccatcgacatcgacaaacgccaagtccacggg
tacactgaattggagattgcggtaccggagattgggatcgtagggttgcacgcggaaaat
ttagggattgagagtgtttgggttgacggcgagcccacggagttcgagtattacccgcac
cgtcagcagcaggccgaggatgacaagaggtttagctccgtgtgttctcctagctctgct
gctgatgctgctgtctcagtgtacatgtccgctctcgagaaggaactggttcccaattta
ctcattaattgttgcaaaccttcaaaggctgaaagtgaacaacagcaggagcgacaaccc
gcttctgagaacgggtttcactcctcggctgagcccaagcagaatgtcagaactgttcgt
attgactattggatagagaaggcagagacaggaatacacttcagaaataatcttcttcat
accgataatcagataaggagagcaaggtgttggttcccttgtatagatgacaattcgcaa
cgatgctgctacgacctggagttcactgtagcacataatcttgtggctgtcagtacagga
agcttgctttatcaggtcttaagcaaggacaatcctcctcggaaaacatatttctataaa
ttggatgttccagttgctgcaaggtggatatctttggctgttgccccatttgaagttttt
cctgatcaccaatttagtcttatatctcatatgtgttcgccgcctaatctgtcaaagatg
cggaatacagtggattttttccacagtgccttcagctgctataaggattttctttctgta
gacttcccgtttgactcatatacgcaagttttcatagagccagagatggcagtgtcatca
ttgagtttgggagcctctatgagtatatttagttcccaagttttgtttgatgagaaggtt
attgaccagactattgatacaagggttaaacttgcatatgctctcgcaagacagtggttt
ggtgtgtatatcactcctgaggcaccaaatgatgagtggctcttggatggacttgctggt
ttcttgacagatttttttattaagaaacatttgggaaacaatgaggcacggtacaggaga
tacaaggaaaattgtgctgtttgcaaagttgataatgatggagcaacagctttgagctgt
tcagcttcctgtaaagatttatatggaactcagtgcattggtttgtatggaaaaattaga
tcatggaagtctgtggcagttcttcagatgttggaaaagcaaatgggtcctgaatctttt
cgtagaattttgcaaactatagtttctcgtgctcaagataaaacacgttccataaagact
cttagtactaaggagtttcgacattttgctaacaaggttgggaatcttgaacgcccattt
cttaaagacttctttcctcggtgggtcagttcttgtggatgtcctgttttaaggatgggg
ttttcctataacaaaaggaagaacatggttgaattggccgtgttgcggggatgtacaaca
ttgcagacttcaagtacatccattcttgatattaatcctgacacagaaactcgagatgga
gatattggatggcctggtatgatgagcatcagggtatatgaacttgatggtatgtatgac
catccaattctaccaatggctggagaagcatggcaactattggaaatacaatgccactca
aagcttgccgctaggcgctttcagaagcccaagaaaggtttaaaacttgatggctctgat
gataatggtgatgtgccttccatggatatgcgcttgaataccgagtcccctttattatgg
attagagcagatcctgatatggagtaccttgctgaggttcattttaaccaaccagttcaa
atgtggatcaatcaattagagaaggacaaagatgttattgctcaggcacaagcaattgca
gcccttgaggcatccccacagctatcattttctattgtaaatgccctaaacaattttctc
agtgactcaaaggctttctggagagtacggattgaagcggcatttgcattggcaaattca
gcatctgaggaaactgatttttctggtctacttcatttggtgaaattttacaagagtcga
aggtttgatcctgacattggactgccaaagccaaacgattttcaagactttgctgagtat
tttgttcttgaggctattcctcatgctgttgctatggttagagcagctgacaagaaaagc
ccaagagaagctatcgagtttgttttacagctattgaagtacaatgacaacaatgggaac
ccttactctgatgtcttctggcttgctgcgttggtccagtcagttggcgagcttgagttt
ggacaacagagtattctcttattgtcatcactcctcaaacgcattgaccggcttctacaa
tttgatagtctcatgccaagctacaatggaatcttgactatcagttgtatccggacattg
acccagattgcattaaagctttcggggttcattcctcttgatcgagtttatgaacttgta
aagccttttcgggacttaaaggcattgtggcaagttcaaattgaagcaagtaaagcactc
cttgatcttgaattccactgcaagggcatggattcagctttgcttttatttatcaaatac
atagaggaggagcattccttaagagggcagttaaaactggccacccatgttatgaggcta
tgtcagatgagggatggattgaattcaaatgacgaaattacaagccaaactcttgtctct
atgcttaatttactagaagggcgtatagcttttaataatgtctctctccggcactacttg
ttctgcatattacaaatacttgcaagaagacccccaactcttcatgggattcccagagga
aacagaatgctgcatatgagtcttgcagaagcttgtaactatcagaagaacatatttgct
cttgattcagaaagcaaacccttggatctgcctagctctaccaaaaatcttacacaaaat
ttgggcccgacaatggagggcttgagggatgcagttgatgaagctcctaaggaccaacct
tgtgaagcttccacacaggtgcaccttgaagctttaaaggaagcatctctagagaagccc
aaagaggtatttactgaatttccccaggaagcaccaattgaagctccaaatccaaatgaa
gtttccaaggaagttgatactgtatcgaatagccatgaaagaaagaggcccattaaaatc
aaggtcaagcaatcttctgccaccagtagggctgatactgataatcaagtggttgaatgt
tctttaggtggtcgtaatgaaatggatcatggagctagtagttcagtttctgtagatgca
ccccagaggaattttgccgagactgttagcatcagtaatcataatattgacgaagttaat
tcttggcatgatcgtggttctcgcatgactgccagcattggcagtgcaaagtttttgagt
gatggtgatgaattggtcaaagaactgcagtgcactgctgattcaagtatagtttattca
caacctcagccagaagatccatcatcatccagtattatccaggataacaatatagatgct
gatgcacgacgatatgccagccttcaaactctttcagttgcaagatttgatcctgacgga
gaatcattaggtaaagaaatttctgctcgggggaaagaaaagcacaaaagcaaggaaaag
aaacggaaacaggaaagtaataaaggacaccatgatgatgtagaatatttggagcgaaaa
cgactaaagaaagagaaaaaacatcgggaaaaagagctggcaaaacttcagagtgatgaa
gcaaagagatcctccattgatttgtcaagcaagaaagtggaacccgtagtggacgttgct
agacaggttaaatctgttgaacccagtggatataattctaaagtagaaataaaaaagata
gataccaaaccggagccatctgaaggcacatctggtgcaccaaaaattcgaattaaaatt
aaaaaccgaatgctcagcaagtcctag
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