KEGG   Glycine soja (wild soybean): 114411964
Entry
114411964         CDS       T06057                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    114411964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gsj03009]
    114411964
Ribosome biogenesis [BR:gsj03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    114411964
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Utp13 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_TEP1_C WDR90_beta-prop_4th NBCH_WD40 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_SPT8 ANAPC4_WD40 PEP5_VPS11_N Beta-prop_Nup120_160 Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Ge1_WD40 Beta-prop_NWD2_C WD40_like WDR54 Beta-prop_Vps41 Cytochrom_D1 Beta-prop_NOL10_N RAB3GAP2_N
Other DBs
NCBI-GeneID: 114411964
NCBI-ProteinID: XP_028231517
LinkDB
Position
5:3323121..3333436
AA seq 883 aa
MEPLRLKTNYRCVPALQQFYTGGPFVVSSDSSFIACACGESIKIVDSATAAIRSTLGADS
ESFTALALSPDDRLLFSSGHSRQIKVWDLSTLKCVRSWKGHEGPVMCMTCHPSGGLLATG
GADRKVLVWDVDGGYCTHYFKGHGGVVSCVMFHPDPEKQLLFSGSDDGGDHATVRVWDIS
KTKKKNCIATLDNHSSAVTSLALSEDGWTLLSAGRDKVVTLWDLHDYSSKKTVITNEAVE
AVCVLGSGSPFASSLDSYQQNLKKRDGSQIFYFITVGERGIVRIWNSKGAGCIFEQKTSD
VTANIDEDGSRRGFTSAVMLASDQGLLCVTADQQFLFYSLECTEELLQLNLTKRLVGYNE
EIVDMKFIGDDEKFLALATNLEQVRVYDLASMSCSYVLSGHTEIILCLDTCVSSSGKTLI
VTGSKDNSVRLWESESANCIGVGIGHMGAVGAIAFSKRKQDFFVSGSSDHTLKVWSMDGL
SDNMTMPINLKAKAVVAAHDKDINSVAVAPNDSLVCSGSQDRTACVWRLPDLVSVVVFKG
HKRGIWSVEFSPVDQCVVTASGDKTIRIWAISDGSCLKTFEGHTSSVLRALFVTRGTQIV
SCGADGLVKLWTVKTNECVATYDHHEDKVWALAVGRKTEKLATGGGDAVVNLWFDSTAAD
KEEAFRKEEEGVVKGQELENAVSDADYTKAIQIAFELRRPHRLFELFAELCRKREAEDHM
DRALKGLGSEELRILFNYIREWNTKPKLCYVSQFVLFRVFSIFPPTDIVQIKGIGEFLEG
LIPYSQRHFGRIDRLVRSTFLLDYILSGMSVIEPQVQPTESKAELLLQSEIDIPDKENGI
EKKDHTHEITASKKRKSNKSKHGSHKKVKNVAYNKVESIQLQA
NT seq 2652 nt   +upstreamnt  +downstreamnt
atggaacccctccgactgaagaccaactaccgctgcgtccccgctctgcagcagttctac
accggcggccccttcgtcgtctcatcggactcctccttcatcgcctgcgcctgcggcgag
tccatcaagatcgtcgattccgccaccgccgccatccgctccaccctcggcgccgactcc
gaatccttcaccgccttggctctcagccccgacgaccgcctcctcttctcctccggccac
tcccgccaaatcaaagtctgggacctgtccacgctcaagtgcgtccgctcctggaagggt
cacgagggtccggttatgtgcatgacgtgtcacccttctggagggttgcttgctactggt
ggagctgatagaaaggttcttgtgtgggatgtggatggtggttactgcacgcattacttt
aaaggtcacggtggtgtcgtttcttgtgttatgttccatcccgatcctgagaaacagctt
cttttttctggcagcgatgatggtggtgatcatgcaactgtaagggtttgggatatttcc
aagaccaagaaaaagaactgcattgcaacactagataatcatagctcagcagtgacttct
ttggcattatctgaagacggatggacactgcttagtgctggaagagataaggttgtaacg
ttgtgggaccttcatgattatagcagcaagaagactgtcattacaaatgaggcagttgaa
gctgtttgtgtacttggttctgggagtccttttgcttcatctctggattcatatcagcaa
aatttaaaaaaacgtgatggttcccaaatattctatttcattacagttggtgaacgaggc
attgtacgcatatggaattccaaaggtgcaggttgcatctttgagcaaaaaacttcagat
gttacagccaacatagatgaggatggctcacgtaggggtttcacttctgctgttatgctt
gcctcagatcaaggattgctttgtgtgactgcagatcagcagtttctgttttactctctg
gaatgcactgaagagttgttgcaattaaatctaaccaaaagacttgtgggatataatgaa
gagattgttgatatgaagtttattggggatgatgaaaaattccttgctctggctacaaat
cttgaacaggttcgagtttatgaccttgcatctatgtcatgttcgtatgtcttatctggt
cacactgaaattattctatgccttgacacctgtgtatcaagttctgggaaaacactgatt
gtaactggaagtaaagacaacagtgttaggttatgggaatcagaaagtgcaaactgcatt
ggagttggtattggtcacatgggagctgttggagccattgccttttcaaaaagaaagcaa
gatttctttgttagtggcagtagtgatcatactcttaaggtgtggagtatggatggcctc
tcagacaatatgacaatgccaattaatttaaaagcaaaagctgttgttgcagctcatgat
aaagatataaattccgtagctgttgctccaaatgatagtttagtatgtagtggttctcag
gatcgtacagcttgtgtttggagacttccagatctagtatcagtagttgtatttaaaggg
cataaaagaggaatttggtcagtagaattttctcctgttgatcaatgtgtagtaacagca
tctggtgataagacaataaggatatgggctatatctgatggctcctgtttgaagacattt
gaaggacacacgtcaagtgtgttaagagcattgtttgttactcgtggaacacaaattgtt
tcttgtggtgctgatggtttagtaaagctgtggactgtaaaaactaatgaatgtgttgct
acttatgatcatcatgaagacaaggtttgggccttggctgtaggcaggaaaacggaaaag
cttgcaactggtggcggagacgctgttgtcaatttatggtttgattccactgcagcagac
aaagaagaagcttttcgaaaagaggaagagggagttgtgaaaggtcaagagctagagaat
gctgtctcagatgctgactatactaaagcaatccaaatcgcatttgaactgcgcaggcct
cataggctttttgagctatttgcagaactttgcaggaagagagaggctgaagatcatatg
gacagagcacttaagggcttgggtagtgaagagcttcgtatattatttaactatattcga
gaatggaatacaaaaccaaagctttgttatgtttctcagttcgtgcttttcagagttttc
agcatctttcctccaacagatattgtccagattaaagggattggcgaatttcttgaaggt
cttatcccatatagtcagaggcattttggcaggatagacagacttgttagaagcacattt
ttgttagactacattctatcgggaatgtcagttattgaaccacaagttcaaccgacagaa
tcaaaggctgagttactgttgcagtctgaaattgacattccagacaaagaaaatggcatc
gagaagaaagatcatactcatgaaattaccgcttcaaagaaaaggaaatcaaacaaatca
aaacatggttcccataagaaagttaagaatgtagcttacaacaaggtcgaatctatacaa
ttacaggcatag

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