KEGG   Glycine soja (wild soybean): 114411989
Entry
114411989         CDS       T06057                                 
Name
(RefSeq) histone deacetylase 6-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03082  ATP-dependent chromatin remodeling
gsj03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    114411989
   03083 Polycomb repressive complex
    114411989
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gsj03036]
    114411989
Enzymes [BR:gsj01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     114411989
Chromosome and associated proteins [BR:gsj03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     114411989
   HDAC complexes
    Sin3A-HDAC complex
     114411989
    BRAF-HDAC complex
     114411989
    REST complex
     114411989
    SHIP complex
     114411989
    MiDAC complex
     114411989
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     114411989
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    114411989
  Chromatin remodeling factors
   NuRD complex
    114411989
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 114411989
NCBI-ProteinID: XP_028231550
LinkDB
Position
5:complement(3587713..3591936)
AA seq 476 aa
MGMEEESSNNSSIIEGGASLPSTGSDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAH
NLIVHYSLHRRMEINRPFPASPADIRRFHSDDYVDFLSSVSPETLADSAFSRHLKRFNVG
EDCPVFDGLFPFCQASAGGSLGAAVKLNRADADIAINWAGGLHHAKKSEASGFCYVNDIV
LGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHVKDIGVG
SGKNYAVNVPLNDGMDDESFRSLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLS
VRGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYF
GPDYTLYVDPSNMENLNTPKDMEKIRNTLLEQISQLPHAPGVPFQTTPPTLQLPEEAEED
MDRRPKLRKWDGEDYDSDPDEGGKANSKFPNVTDHMRDITDEMEEEKPEVHPSSCC
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgggaatggaagaggagagtagcaacaacagcagcatcatagaaggtggtgcttcgctg
ccatcaacgggttcagacgccaagaagcgaagagtgacgtacttctacgagcccacgatc
ggcgattactactacggtcaggggcacccaatgaagccgcaccgaatccgcatggcgcac
aacctcatcgtccactactccctccaccgccgcatggagatcaaccgtcccttcccggcc
tcccccgccgacatccgccgcttccactccgacgactacgtcgactttctctcctccgtc
tcccccgagaccctcgccgattccgccttctcccgccacctcaagcgcttcaacgtcggc
gaggactgccccgtcttcgacggcctcttccccttctgccaggcctccgccggcggctcc
ctcggcgccgccgtcaaactcaaccgcgccgacgccgacatcgccatcaattgggccggc
ggcctccaccacgccaagaagtccgaggcctctggattctgctacgtcaacgacattgtc
ctcggtatcctcgaactcctcaaagttcacaggcgcgtgctgtatgttgacattgatgtt
caccacggtgatggtgttgaggaggccttttacaccactgatagagtgatgacagtgtct
ttccataagtttggggactttttccctggcacaggacacgtcaaggacattggggtggga
tcaggaaagaattatgcagtcaatgtcccattaaatgacggaatggatgatgagagtttc
cgtagtctgtttcgaaccatcattcaaaaagtcatggaggtctatcaaccagaggcagtt
gttctacaatgtggagctgattcattgtctggggacaggttgggttgcttcaacttgtct
gtgagaggtcatgcagattgccttcgttttcttagatcgttcaatgttcctttaatggtc
ttgggtgggggtggatatacaattcggaatgttgcccgttgttggtgttatgagacagca
gtggcagtaggagtggagcctgataataagttgccttataatgaatattatgaatatttt
ggcccagattatactctctatgtcgatccaagcaacatggagaacctaaacacacccaag
gatatggaaaaaataaggaacacactactagaacagatttctcaacttccccatgctccc
ggtgtaccttttcagacaacaccacctaccttacaacttccggaagaggcagaagaggac
atggatagaagacctaaacttcgcaaatgggatggtgaagattatgattctgatccagat
gaaggtggaaaggctaattccaagtttccaaacgtcactgaccatatgagggacattaca
gatgaaatggaagaagagaaaccagaagtgcatccatcatcttgttgttga

DBGET integrated database retrieval system