Glycine soja (wild soybean): 114411993
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Entry
114411993 CDS
T06057
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 30-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114411993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114411993
03009 Ribosome biogenesis [BR:
gsj03009
]
114411993
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114411993
Spliceosome [BR:
gsj03041
]
Complex A
U1 snRNP components
U1 related factors
114411993
Complex B
114411993
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
Helicases
114411993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
114411993
NCBI-ProteinID:
XP_028231554
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All DBs
Position
5:complement(3637025..3642320)
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AA seq
606 aa
AA seq
DB search
MNPYDSRYSDASSFRGRRSDFVGPIPPPSFVGRGGAVSYGVPGPNGFRSAPVAPVPPFVP
PSGGFNVGRGGGRAGYGHVSDRMGRSGGGRGRGGGGGGGGRAGAHGFRGSGRGGGRHGGG
SSRDDLNNIALPKQDFKNLVPFEKNFYVECPAVRAMSEQEVLHYRASREITVQGNDVPKP
VRMFHEANFPDYCLEVIANLGFAEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPA
LVHVNAQPRLAHGDGPIVLVLAPTRELAVQIQEEALKFGSRANKRSTCIYGGAPKGPQIR
ELKRGVEIVIATPGRLIDMLEAQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPD
RQTLLWSATWPREVETLARQFLRNPYKVIIGSPYLKANQSINQVVEVLTDMEKYNRLIRL
LKEVMDGSRILIFMETKKGCDQVTRQMRVDGWPALSIHGDKNQAERDWVLAEFKSGRSPI
MTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAYTFFTHANAKFAR
DLIKILQDAGQVVSPALSALVRSAGSGQFGSGGSFRSRGRGGYGNRGLTSGSNAIPLGSK
RPWQCL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaacccctacgacagcagatattctgacgcctcttcttttcgcggccgtcgtagtgat
ttcgttggacctattccgccgccgtctttcgtcggccgcggcggcgcggtttcctacggc
gtccctggacccaacgggttccgatccgcacccgttgctccggtcccaccctttgtgcct
ccttccggaggctttaatgtaggtcgaggcggtggcagagcgggctatggtcacgtgagt
gatagaatgggtcgtagcggtggtggaagaggtcgtggtggtggcggcggcgggggcggt
agagccggagctcacggttttaggggctccgggagaggaggaggcagacacggtggtggt
tcttctagggatgatttgaacaacattgcacttccaaagcaggattttaagaatttggtc
ccttttgagaagaacttctatgttgagtgccctgcagtgagggccatgtctgagcaagaa
gttttgcattaccgtgccagtagagagatcaccgtgcaagggaacgatgtgccgaagcct
gtaaggatgtttcatgaggcgaattttcctgattactgccttgaggttattgccaatctg
ggttttgcggagcccacccctattcaggctcagggttggcccatggctcttaagggtaga
gacttaattggcattgctgagactggctcgggtaaaactttgtcgtatctgcttcctgct
ttagtgcacgtcaatgcacaacctcgattggcacatggggatggtcccattgtcttagtt
ttagcaccaacaagagagttggctgttcaaattcaagaagaggctctgaaatttgggtcc
cgggcaaataaaagaagtacgtgcatctatggcggcgcaccaaagggcccccaaattcgg
gagcttaaaagaggcgttgaaatagttattgctacacctggtcgtctaatagatatgttg
gaagctcagcacacaaacctgaagagagtgacttaccttgtcttggatgaagctgatcga
atgctagacatgggttttgaacctcagatacggaaaattgtagcccagattcgaccagat
aggcaaacactattatggagtgctacatggccaagggaggttgaaactctggcaaggcag
tttctgcgcaacccatacaaggtaattattggctcaccatacctgaaggcaaatcaatct
ataaatcaagttgttgaagttttaacagacatggagaaatacaatagattaatcaggctg
ctgaaagaagtgatggacgggagccgaattctaatatttatggagacaaaaaagggatgt
gatcaagttaccagacaaatgagagtggatggatggccagcactatccatccatggtgat
aaaaaccaggctgaaagggattgggtcttggctgaatttaagagtggcagaagtccaata
atgactgccactgatgttgctgcacggggtcttgatgtgaaagacataaaatgtgtgatc
aattatgattttccatcaagcctggaagattatgtccacagaattggtcgaactggtcgt
gcaggggctaaaggaactgcatacaccttttttacacatgccaatgccaagtttgctagg
gatctgattaagattttacaagatgctggtcaggttgtgagtcctgctttgtctgcattg
gttcggtcggctggttctggtcaatttggatcagggggaagttttcgctcaagaggacga
ggaggctatggaaatcgaggtttaacgtcaggttccaatgccattcctctaggttcgaag
aggccctggcagtgtctgtag
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