Glycine soja (wild soybean): 114412020
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Entry
114412020 CDS
T06057
Name
(RefSeq) autophagy-related protein 16-like
KO
K17890
autophagy-related protein 16-1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
114412020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsj04131
]
114412020
03029 Mitochondrial biogenesis [BR:
gsj03029
]
114412020
Membrane trafficking [BR:
gsj04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
114412020
Others
Specific organelles associated proteins
Auto phagosome
114412020
Mitochondrial biogenesis [BR:
gsj03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
114412020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
ATG16
WDR90_beta-prop_4th
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR54
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_Nup120_160
KNTC1_N
eIF2A
PQQ_2
PEP5_VPS11_N
Beta-prop_EIPR1
Cytochrom_D1
Beta-prop_RIG_1st
Beta-prop_Vps41
Beta-prop_IP5PC_F
Cep57_CLD_2
SHE3
Motif
Other DBs
NCBI-GeneID:
114412020
NCBI-ProteinID:
XP_028231584
LinkDB
All DBs
Position
5:3847494..3850860
Genome browser
AA seq
514 aa
AA seq
DB search
MAKAWKSQEEIASEAIKHTLRALRKRHLLEEAAHAPAVLALSRPIVSQGSEWKEKEENLQ
VELQQCYKAQSRLSEQLVVEVAESRASKALLQEKENALADLQKELTELRDECSQLKVDLE
EKIKSLEVIVSENSELKAQLEQMTIKANKAEAENKMLIDRWMLEKMKDAERLNEANALYE
EMVEKLRASGLEQLARRQVDGIVRQSEEGAEFFLESNIPSICKYRLRAHEGGCASMLFEY
NSSKLITGGQDRLVKMWDANTGSLSSTLQGCLGSVLDLTITHDNRSVIAASSSNNLYVWD
VNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTIKVWDLVKGYCTNTIIFHSNCN
ALSFSMDGQTIFSGHVDGNLRLWDIQSGKLLSEVAAHSLAVTSLSLSRNGNVVLTSGRDN
LHNLFDVRSLEVCGTLKAMGNRVASNWSRSCISPDDNHVAAGSADGSVYIWSISKGDIVS
TLKEHTSSVLCCRWSGIGKPLASADKNGIVCVWT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcatggaagtcacaagaagaaattgccagtgaagctatcaagcatactttg
agggctctgcggaagcgccatttgcttgaggaagctgctcatgctcccgctgttctagct
ctttctagacccatcgtttctcagggctctgagtggaaagagaaagaagagaatcttcaa
gtggaacttcagcaatgctacaaagctcaatctcgcctgtctgagcaacttgttgtggaa
gtagctgagtccagagcttcgaaagcgttgcttcaagagaaagaaaatgcattggctgat
ctgcagaaggagttgactgaattgagggatgagtgctctcaattgaaggtggacttggaa
gaaaagattaaatctctggaagtgattgtcagcgagaattctgaacttaaagcacaactg
gagcagatgactattaaagccaataaagctgaagcagaaaataagatgttgatagaccgc
tggatgttagaaaagatgaaggatgctgaacgcctaaatgaggccaacgcactgtatgaa
gagatggttgagaaactaagggccagtgggttagaacaacttgcaaggcggcaggtggat
ggtatagttcgccaaagtgaagaaggtgctgagttctttttagagtcaaacatcccttcc
atatgtaaatacaggcttcgtgcacatgaaggtggttgtgcttccatgttgtttgaatac
aattccagtaaattgattactgggggacaagatcggttagttaaaatgtgggatgcaaat
acaggatccttaagttctactcttcagggctgccttggctcagtattggatctcacaatc
acccatgataatcgatctgtcattgctgcaagcagctcaaacaacttgtatgtatgggat
gtcaactcaggtcgtgtccgccatacccttactggccacacagataaagtttgtgctgta
gatgtcagcaagatttcaagtcgtcatgttgtcagtgctgcctatgatcgtacaataaaa
gtttgggacttagtgaaaggttactgcacaaacacaataatatttcacagcaactgcaat
gctctttccttcagcatggatggtcagaccatattttcgggacatgttgatggtaacctt
cggctatgggacattcaaagtggaaagttacttagtgaggttgctgcacattcacttgca
gtcacatcactatccctttctcgaaatggaaatgttgtactgaccagtggaagggacaat
ttacacaatttgtttgatgtgcgatctctggaagtttgtggcacattaaaagccatggga
aacagagtggcttctaattggagtcgctcctgtatcagcccagatgacaatcacgttgct
gcagggtctgctgatggatctgtctatatttggtcaatatctaaaggtgatatagtcagt
actctgaaggaacacacttcctctgttctgtgttgtaggtggagcggaattggaaaaccc
ctagcttctgctgataagaatgggattgtttgcgtctggacatga
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