Glycine soja (wild soybean): 114412067
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Entry
114412067 CDS
T06057
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03030
DNA replication
gsj03410
Base excision repair
gsj03420
Nucleotide excision repair
gsj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114412067
03410 Base excision repair
114412067
03420 Nucleotide excision repair
114412067
03430 Mismatch repair
114412067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsj03032
]
114412067
03036 Chromosome and associated proteins [BR:
gsj03036
]
114412067
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114412067
DNA replication proteins [BR:
gsj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114412067
DNA Replication Termination Factors
ELG1-RFC complex
114412067
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
114412067
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114412067
Check point factors
HRAD17(Rad24)-RFC complex
114412067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
AAA_16
Rad17
Mg_chelatase
Viral_helicase1
RuvB_N
AAA_11
AAA_19
AAA_5
AAA_assoc_2
AAA_28
nSTAND3
AAA_25
AAA_30
AAA_18
AAA_3
AAA_24
RNA_helicase
NTPase_1
bpMoxR
IstB_IS21
T2SSE
DNA_pol3_gamma3
SLFN-g3_helicase
MeaB
Motif
Other DBs
NCBI-GeneID:
114412067
NCBI-ProteinID:
XP_028231637
LinkDB
All DBs
Position
5:4298804..4302290
Genome browser
AA seq
331 aa
AA seq
DB search
MSSSSSSNAYDVPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT
SILALAHELLGGPNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLTPGRHKIVILDEA
DSMTTGAQQALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLM
VVVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHV
KNMVRNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
HMRICDGVGSYLQLCGLLAKLSLVRETAKAV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgtcatcatcaagcaacgcctacgacgtgccatgggtagaaaagtaccgtccc
agcaaggtcgccgacatcgtcggcaacgaggacgccgtctccaggctccaagtcatcgct
cgcgacggcaacatgcccaatctcattttatccggtcctcccggaaccggcaaaacaact
agcattctcgccctcgcgcacgagcttctcggaggaccaaattgcaaggaagctgttctc
gaactaaacgcttcggatgatagaggaattgatgttgtgaggaacaagatcaagatgttt
gctcagaagaaagtcacactgaccccggggaggcacaagatagtgatactggatgaagct
gatagcatgaccacaggggcacaacaagcattgagaaggacgatggagatatattcaaac
accactcggtttgcccttgcttgcaatacctcagctaagattattgagcccattcagagt
agatgtgccattgtgcgattttcacggttgtctgatcaagagatacttggtcgtctcatg
gttgtggttcaagctgagaaggttccctatgttcctgaaggacttgaagccatcattttc
acagctgacggtgatatgagacaggcattgaataacttgcaagcaacatacagtgggttc
caatttgttaaccaagcaaatgttttcaaggtttgtgaccagccacatccactgcatgtg
aagaatatggtgcgtaatgtgattgaagggaattttgatgaagcttgttcaggcctcaag
caactgtatgacttgggatattcccccacagatatcatcacgacactctttcgtataata
aaaaattatgatatggccgagtacctgaaattggaattcatgaaggaaactggttttgct
catatgagaatttgtgatggagttggttcttatcttcagttgtgtggtctattggctaag
ctttctctagttcgtgagacagctaaagctgtatga
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