Glycine soja (wild soybean): 114412348
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Entry
114412348 CDS
T06057
Name
(RefSeq) replication factor C subunit 3-like isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03030
DNA replication
gsj03410
Base excision repair
gsj03420
Nucleotide excision repair
gsj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114412348
03410 Base excision repair
114412348
03420 Nucleotide excision repair
114412348
03430 Mismatch repair
114412348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsj03032
]
114412348
03036 Chromosome and associated proteins [BR:
gsj03036
]
114412348
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114412348
DNA replication proteins [BR:
gsj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114412348
DNA Replication Termination Factors
ELG1-RFC complex
114412348
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
114412348
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114412348
Check point factors
HRAD17(Rad24)-RFC complex
114412348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
Sigma54_activ_2
ABC_tran
RsgA_GTPase
DUF815
AAA_5
AAA_29
RuvB_N
AAA_16
nSTAND3
AAA_24
AAA_22
AAA_23
Mg_chelatase
ATPase_2
SprT-like
AAA_7
AAA_2
nSTAND1
Motif
Other DBs
NCBI-GeneID:
114412348
NCBI-ProteinID:
XP_028231991
LinkDB
All DBs
Position
5:complement(14438914..14443368)
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDQVMVHTDIAHNLKKLVTEQDSPHLLFYGPSGSGKKTLIMALLRQMFG
PGAEKVKVENRTWKIDAGSRSLDLELTTLSSANHIEMSPSDAGFQDRYIVQEVIKEMAKN
RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR
CLNVRINAPSEEQIVQVLEFIGKKEGLQLPPGFAARIAEKSNRNLRRAILSFETCRVLQY
PFTNKQAIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYE
LLRKLDAELKHEVCHWAAYYEYRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggtggacaaatatcgtcccaaaaccctcgaccaggttatggtccacaccgac
atcgctcataatctcaagaaattggtaacggaacaggattccccccatttactcttctat
ggcccatctggctctggcaagaaaaccctaatcatggctcttctccgccaaatgtttgga
cctggtgctgaaaaggtgaaggtggaaaataggacctggaaaatcgacgctgggagtaga
tctcttgatttagagctgacaacattatcaagtgccaatcacattgaaatgagtccgagt
gatgcagggtttcaggatagatacattgttcaggaagtaatcaaagaaatggctaagaat
agacccattgatactaaggggaagaaaggatttaaagtacttgtgctcaatgatgttgac
aaactctctagagaagcccaacactctctccgcagaacaatggagaaatacagtgcttat
tgcagattaattctatgttgcaatagttcttctagagtcacagaagcaatccgctctcga
tgtctcaatgtgcgaataaatgcaccaagtgaagaacagattgttcaagttttagaattc
attggtaagaaagaaggactgcaacttcctcctggttttgctgctcgcattgcagagaaa
tcaaatcggaatttaaggagggccatattgtcgtttgagacttgtcgtgtcctacagtat
cctttcactaacaaacaagcaattcctccaatggactgggaagagtatatttctgagatt
gcatctgacataatgaaggaacagagcccaaaaaggttgtttcaagttcgaggaaagctc
tatgagctgctaatcaattgcattcctccggagatcattttaaagaggcttctttatgag
ctattgaggaaactggatgcagaactaaagcatgaagtatgtcattgggctgcatattat
gaatacaggatgcgtctcggacagaaggcgatctttcacattgaagcatttgtggccaag
ttcatgagcatttataaatccttccttattgcaacattcggctga
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