KEGG   Glycine soja (wild soybean): 114412670
Entry
114412670         CDS       T06057                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03020  RNA polymerase
gsj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114412670
  09124 Replication and repair
   03420 Nucleotide excision repair
    114412670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gsj03021]
    114412670
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114412670
   03400 DNA repair and recombination proteins [BR:gsj03400]
    114412670
Transcription machinery [BR:gsj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     114412670
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     114412670
DNA repair and recombination proteins [BR:gsj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      114412670
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 114412670
NCBI-ProteinID: XP_028232448
LinkDB
Position
5:34260059..34264584
AA seq 176 aa
MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATV
NT seq 531 nt   +upstreamnt  +downstreamnt
atgtttttccacatagtgctggagcgaaatatgcagctgcatccacgctactttggtcgc
aaccttcgtgataatctcgtttccaagctaatgaaagatgtggaaggcacttgcagcggc
cgacatggatttgtggtggcagttacagggatagaaaacatagggaaagggctaattcgt
gatggaacagggtttgtgacatttccggttaagtaccaatgtgttgtcttcagaccattt
aagggagagatcctggaagctgttgttactatggtgaacaagatgggattttttgctgaa
gctggacctgtccaaatctttgtttcaaaccatttgattccggatgatatggagttccag
tctggagacatgccaaattacactacatcagatggatcagttaagattcaaaaagatagt
gaagtgagactaaagataattgggactcgagtggatgctactgaaattttctgcataggt
accataaaagatgatttcttgggtgtgatcaacgaccctgcaacagtttaa

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