Glycine soja (wild soybean): 114412832
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Entry
114412832 CDS
T06057
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1-like
KO
K14848
ribosome assembly protein RRB1
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsj03009
]
114412832
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
114412832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
CAF1C_H4-bd
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
114412832
NCBI-ProteinID:
XP_028232703
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Position
5:complement(36127778..36132646)
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AA seq
473 aa
AA seq
DB search
MTRGIKHRQKAKSKKKVSKKESGSSSSLAPEIPAKVWQPGVDKLEEGEELQCDPSAYNSL
HAFHIGWPCLSFDILRDSLGLVRKEFPHTVYFMAGTQAEKPSWNSIGIFKVSNITGKRRE
PVPKLGTDDTEMDGEDSDSDDDSEDEEGGAQGPSLQLRKVAHQGCVNRIRSMPQNPHICA
AWADTGHVQVWDLNSHLNALAESETEGVQGVAAVFNQDPLYKFKHKDEGYAIDWSPLVPG
RLASGDCNNCIYLWEPTSAGTWNVDNAPFTGHTASVEDLQWSPTEPDVFASCSVDGNIAI
WDTRLGKSPAASFKAHNADVNVMSWNRLASCMLASGSDDGTISIRDLRLLKEGDSVVAHF
EYHKHPITSIEWSPHEASSLAVSSSDNQLTIWDLSLEKDEEEEAEFKAKTKEQVNAPEDL
PPQLLFIHQGQKDLKELHWHAQIPGMIVSTAADGFNILMPSNIQSTLPSDGAV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcggcataaaacaccgtcagaaagccaagagcaagaagaaggtctcgaagaaa
gagagtgggtcttcttcatctttggcgccagaaattcccgcgaaggtgtggcaaccgggt
gtggataagttggaggaaggtgaagagcttcagtgtgatccttctgcttacaattctctt
catgcctttcacattggatggccatgtttgagctttgatattttacgtgactctttgggc
ttggttcgaaaagaatttccccacactgtatatttcatggcagggactcaggcagagaaa
ccttcttggaattctattggaatttttaaagtatcaaatattactggaaagagacgtgag
ccggtgcctaaacttggaactgatgacactgaaatggatggtgaggatagtgacagtgac
gatgatagtgaggatgaagaaggtggtgctcagggtcccagtttgcagttgcggaaggtt
gctcaccaaggatgtgtcaaccgtatacgctctatgccacaaaatccccatatatgtgca
gcttgggccgataccggtcatgtacaggtctgggacctcaactctcacctcaatgctcta
gctgagagtgaaacagaaggtgtccaaggagttgctgcagtttttaatcaggacccattg
tataaatttaaacacaaagatgaaggttatgctatagactggagtcctcttgttcctgga
aggcttgcatctggggattgcaataattgcatttatctgtgggagcctacatctgctgga
acatggaacgttgataatgctccatttactggacatactgctagtgttgaagatctgcaa
tggagccctacagaacctgacgtttttgcttcttgttccgtggatggaaacattgcaata
tgggatacccgtttggggaagtcaccagctgcatcttttaaggcacataatgctgatgtg
aatgtaatgtcatggaacaggttggctagttgtatgttggcctctgggagtgatgatggg
actatttctattcgtgatctcagactgctcaaggaaggagattctgtggtagcacatttc
gaatatcacaagcacccaatcacatccattgagtggagtccacatgaagcctcttcatta
gcagtttcttcatctgataatcagcttactatatgggacctttctttagaaaaggatgag
gaagaggaggctgaatttaaagctaaaaccaaagaacaagttaatgcccctgaagatttg
cctccccaactattgtttattcaccagggacaaaaagacctgaaggaactacattggcat
gcgcagattcctggaatgattgtttctaccgctgccgatggattcaacattcttatgcct
tcaaatattcagagcacactgccatcagatggtgctgtataa
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