KEGG   Glycine soja (wild soybean): 114412848
Entry
114412848         CDS       T06057                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03018  RNA degradation
gsj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114412848
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114412848
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114412848
   03041 Spliceosome [BR:gsj03041]
    114412848
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     114412848
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     114412848
Spliceosome [BR:gsj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    114412848
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 114412848
NCBI-ProteinID: XP_028232734
LinkDB
Position
5:complement(36280284..36283732)
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
TDQTRNLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGS
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcgggcagaaaggaaacggttttggaccttgcaaagtttgtagacaaaggcgttcaa
gttaagcttactggtggcagacaagtgacagggactctgaaagggtatgatcagttgctt
aaccttgtcctagatgaagctgtagagtttttaagagatcctgatgatcccctcaaaact
accgatcagaccagaaatcttggcttaattgtttgtagaggaactgctgtcatgcttgtg
tccccaactgatggtacagatgagatcgccaacccctttatacagccagatgggtcttaa

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