Glycine soja (wild soybean): 114412980
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Entry
114412980 CDS
T06057
Name
(RefSeq) elongation factor 1-alpha-like isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114412980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114412980
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
114412980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Zn_ribbon_RanBP
Mg_chelatase
DZR
Motif
Other DBs
NCBI-GeneID:
114412980
NCBI-ProteinID:
XP_028232914
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Position
5:37407669..37415250
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AA seq
793 aa
AA seq
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MPRKVNYGLDYDDDFYDDDYDDYAYDDADAEDYAEGHDTKQETIKPGLWQCSICTYDNDE
SMTFCDICGVVRRSLVNTGTSNSNKTVEDISKSPGASKLARSLFQSLQQQIPKEIVLFPK
PDDGFLTDDSNFYKLENVRGEFHEIHKAFSTQSHPHLNIDPFKFDVPSPDDVVYTGLRSS
KTGLKDKATNTKSSQLSSSIREKNELSVQSNAESSDNLSSLTRKSKQDSSAKSKLSKNVA
IDLQTSGKTSNSLPESLSKDKGNNINKINSLKNGTIDIQSSKEKSGSLSALSKVKESDNI
SFSSIKDGKPESISSSFNNMALNVRSGNSSGNSDNTNAKGTRSHVSYKPEKWMLPQQAED
TLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKEMHKYEKEAKLQGKGSFAYAWALDES
SEERERGITMTVAVAYFDTKRYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASLGSF
EAGMDGSKGQTREHAQLIRSFGVDRVIVAVNKMDAVVYSKDRFDFIRQQLGVFLHSCGFK
DSSLSWIPMSAMENQNLVASPSDARLKNWYGGPYLLDAIDSLQPPTREFSKPLLMPVCDV
IKSTTLGQVSASGKLEAGALRSGSKVLVMPSAVVGTVRSLERDSNACTVARAGDNVAVML
QGVDGNHVMAGDVLCHPDFPVAVAKHLELKVLVLDGASPILVGTQLEFHIHHAKEPGRVS
RILSVLDPKTGKVTKKSPRCLTAKQSAVIEVILNETVCVVEFSSCKALGRVSLRSMGRTI
AVGVVTRIIEEQG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagtaaattacggactcgattacgacgacgatttctatgatgatgattat
gatgactatgcttatgatgatgccgatgcagaagactatgcagaaggacatgatacaaag
caagagaccattaagcctgggctttggcaatgctccatttgcacttatgacaacgatgag
agtatgactttttgtgatatttgtggtgttgtacgccgttccttggttaacactggaact
tccaacagtaacaaaacagttgaagacataagcaaaagtcctggagcatccaagttggcc
aggtctctttttcaatcattacaacaacagattcccaaagagattgtattatttccaaag
ccagatgatggttttctgacagatgacagtaacttctacaagcttgaaaatgtccgagga
gaatttcatgaaattcataaggcttttagtactcaaagccatccacatttaaacatagat
cctttcaagtttgatgttccatccccagatgatgtggtttatactggcctacgttcttcc
aaaacgggtttgaaagacaaagctacaaacactaaaagttctcagctttcatcaagcatc
agagagaagaatgaactttctgtacaatcaaatgctgaaagttctgacaacttatcatcc
ttaacgcgaaagagcaaacaggatagttcagctaagagcaagctttccaaaaatgtagca
attgatctacaaacaagtggtaaaacttcaaacagcttgccagaatctttgtcaaaagac
aaaggtaacaatattaataaaataaattctttgaaaaatggtacaattgatattcaatca
agcaaagaaaagtcaggtagtttgtctgcactgtcaaaagtcaaggaaagtgataacatt
agtttctcttctatcaaagatggaaaacctgaaagtatttccagcagtttcaacaatatg
gctctcaatgtaagatctggaaattcatctggaaattctgataatactaatgctaaggga
actcgctcacatgtttcttataagccagaaaaatggatgctccctcaacaagctgaagat
acattgactcagctgaatcttgcaattgttggccatgttgattctggaaaatcaactcta
tctggtaggttactgcacctattgggacggatttcccagaaagaaatgcacaaatatgaa
aaggaggccaagttacagggcaagggatcctttgcttatgcttgggcacttgatgaaagt
tctgaagaaagagaaagggggataactatgacagtggctgttgcttattttgacaccaag
agatatcatgttgttgtgctcgactcccctggccataaagattttgtcccaaacatgata
tctggggcaacacaagctgatgctgcaattcttgttatagatgcctcacttggttcattt
gaagctggtatggatggcagcaaagggcaaacaagggagcatgcacaacttatcagaagc
tttggtgttgatcgggttatagttgctgtaaataagatggatgctgttgtgtactccaaa
gatcgatttgattttataaggcagcagctgggagtttttctccactcttgtggtttcaaa
gattcttcgctatcttggattcccatgagtgctatggaaaatcaaaatttggtggcatcc
ccttctgatgcccgtttaaaaaactggtatggtggaccttatctattagatgcaattgac
tctctccaacctcctactagagaattctcaaaacctctactaatgccagtatgtgatgtc
atcaaatcaactacacttgggcaggtgtctgcctctggtaaactagaagcaggagctctt
cggagtggatcaaaggtcttggttatgccttcagctgttgtgggaacagtacgttcattg
gagcgtgactctaatgcttgtactgttgcaagagctggagataatgtagctgtaatgttg
caaggtgtcgatggaaatcatgtgatggcaggagatgtattatgccatcctgactttcct
gttgcagttgctaagcatttggagttgaaagtgctagtgttggatggtgcaagtcccata
ttggtgggcacacagttagagtttcacatacaccatgcgaaggaacctggtagagtttca
agaatattatcagtacttgatcccaagacgggtaaggtgaccaaaaagtcaccccgctgt
ctcactgcaaagcaaagtgcagtaattgaggtgattttgaatgagacagtctgtgtggta
gagttctctagttgtaaagctcttggaagggtgtccctaagatcaatgggaagaacgatt
gctgttggagttgtgacaagaataattgaagaacaaggttaa
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