KEGG   Glycine soja (wild soybean): 114413042
Entry
114413042         CDS       T06057                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    114413042
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gsj03400]
    114413042
DNA repair and recombination proteins [BR:gsj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     114413042
SSDB
Motif
Pfam: XPG_N XPG_I UBM XPG_I_2
Other DBs
NCBI-GeneID: 114413042
NCBI-ProteinID: XP_028233000
LinkDB
Position
1:18452891..18464556
AA seq 1701 aa
MGVHGLWELLAPVGRRVSVETLAGKTLAVDASIWMVQFVKAMRDEKGEMVRNAHLLGFFR
RICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKVRKTAEKLLLNHLKALRLK
ELADDLKNQRMKKNSDTKGQKKSNQKDFVGSDLGGSHVKELDEMSVAKYAAKEDGNSSQA
TILTTYNQEELHEMLAASIAAEKNGIHARKGMPSIVINPLEEERDADEQIILPSVNAEVD
MAVLAALPQSMQLDILAQLKGKKTEGLVKEVDNQNQHDVNYRGKGKGILLIEADMVGCSS
RHDNVTSRSDNQHSIDEMLAASIAMEENEELVNNTSTSVGASAIEEEEVDYDEDEEMILP
AMHGKIDPAVLASLPPSMQLDLLVQMRERLIAENRQKYQKVKKDPAKFSELQIQAYLKTV
AFRRDIDEVQKAAAVGGVGGVQTSRIASEANREYIFSSSFTGDKQELTSTSLEKNKDTQQ
KVQGVHPSQNLTDSIVAGNDSNTSSGLVHNEPGEPADESIQTYLDERGRFRVSRLRAMGM
RMTCDIQRNLDLLKEIEQERAYVNKAANIGTVENAENNGPYESSGIQLVGKSQEMNVDLV
GQNMQNEQTMLDRDTLIEISFEYDCKNKFANDEDDIFSSLVGGNPVAIFGADDTAATEQP
SHSDSDCDWEEGILEGKSNAYPEHDVVELKSSVADDHKNNEREVEWEEGDCDGANSTLLS
GKLASQGWLEEESDLQEAIRRSLESIGDMKLKCMPAVDEHSNTYENKLDCGLEHGDDLYY
SDPVDLNDNVGFLNNKNREDSTEKNELHEIEDGDKKHDFVSGNNEQTFHFHGSQSKSSVT
FNSNNTEILIDTPCRMDSHSCFVDSISDTNVMTKDLVPMVAEQLLDKHDDGKVSFYCDNT
SKVDPVGATEEGKKNYIQESEPLSNSTDTTKPAILVESSLKGSTEDLDIEPKLPSEDSNR
NFYEERNSSLGNDVVNTPGHFPAHAAEVSLEEEMQILGQEYINLENEQRKLERNAESVNS
ELFTECQELLQMFGLPYIIAPMEAEAQCAYLELEKLVDGVVTDDSDVLLFGARSVYKNIF
DDRKYVETYFMEDIEKELGLTREKLIRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDG
LLKFRQWVESPDPTILGRLDANSGSNSRKKGSKIEEKMNSSSCNVKESAVMQNICHAQEQ
NELSDYIQEIKQTFFNKHRNVSKNWHIPSSFPSDTVISAYYSPHVDKSTEPFTWGKPDHL
VLRKLCWEKFGWTGQKADELILPVLKEYNKRETQLRLEAFYNFNERFAKIRSKRIKKAVK
GITGKQPSDLIDDSAEEFSKSRKTGREPEDITLETSRGIEGNLEGRRKSKIKQSRKNDTV
AKEQSKKKKVNDDPSSAPGTSEIENLQPSLQIEEEQHDGKALIRNRSGRGRGRIMGIKRG
RDNKGLSFQSCETEASSGSSDIDDHGPRVHVDRVPKDVRRSMRSRKPVNYSFKEPEDEDS
DDSFDRRNQTGPIEENLSHILGACEDGATDFSMAKECSAMNFPPEENLPTDSLESGGWFC
TDAGETCHPGTGNQDSSDDYLKMGGGFCLDDGDTGVKQDTSDNVDTATVDYNADFPHGSD
YLDETNRDKSSSDILFSGAEKPENGIQGGGPFNIEPNDLASASSYDHSDIAVLKQENTRN
NSGASTGAFSAMPFLKRRRKN
NT seq 5106 nt   +upstreamnt  +downstreamnt
atgggagtccacggtctctgggaactcctcgcccccgtcggtcgccgcgtctccgtcgaa
acccttgccggaaaaaccctagccgttgatgcgagcatatggatggtacagtttgtcaaa
gcgatgcgcgacgagaagggcgaaatggttcgcaacgcccatttgctgggcttcttccgt
cgcatttgcaaacttcttttcctccgcaccaagccggtcttcgtcttcgacggcgggacc
cctgccctcaagcgccgcactgtcattgcacgccgccgccagcgtgaaaacgcccaagcc
aaagtccgcaaaaccgccgagaaattgctgctcaatcatttaaaggcattaaggttgaag
gaactggctgatgatcttaagaaccaaaggatgaagaagaatagtgatactaagggtcag
aaaaaatctaatcagaaggactttgttggaagtgatttaggaggaagtcatgtgaaagag
ctagatgaaatgtctgtggctaaatatgcagctaaggaggacggaaattcttcgcaggca
acaatattgactacttacaaccaggaggaacttcatgaaatgttggcagcgtctatagct
gcagagaaaaatggcatacatgccagaaaaggaatgccgtctattgtaattaatccttta
gaggaggaacgtgatgcagacgaacaaattatattgccatcagtaaatgcagaagttgat
atggctgtattagctgccttaccacaatcaatgcaacttgatattcttgcacagcttaaa
ggaaagaaaaccgaaggactagtaaaggaagttgacaatcagaatcaacatgatgtcaat
tatcggggcaagggtaaggggattctgctcattgaagctgacatggtaggttgtagctcc
agacatgacaatgttacatcaaggagtgacaatcaacactcaattgatgaaatgttagct
gcatctattgctatggaggaaaatgaagagttagtaaataatacatcaacttctgttggg
gcttccgctattgaggaagaggaagttgactatgatgaagatgaagaaatgatactgcca
gctatgcatggtaaaattgatcctgctgttctagcctcattgcctccatcaatgcaactg
gaccttcttgttcagatgagagagcgtttgattgcagagaacagacaaaagtatcagaaa
gtcaaaaaggatccagcaaaattctctgagctacagatacaagcttaccttaaaactgtc
gctttcagacgggacatagatgaagtgcagaaagctgcagctgtaggaggagtaggtggt
gtacagacttcacggattgcatctgaagccaacagagaatatattttctcgtcttctttt
actggtgataaacaagaacttacctccaccagcttagagaaaaataaagatacacaacag
aaggtccagggagtacatccttcacagaaccttacagatagcattgtggcaggaaatgat
tctaatacttcaagcggattggttcacaatgaacctggtgagcctgctgatgaaagtatt
cagacatatcttgatgagaggggtcggtttcgagttagtagattgagagctatggggatg
cgtatgacctgtgatatacaacggaatttggatttgttgaaggagattgagcaggaaaga
gcatatgtgaacaaggctgcgaatattggaacagtggaaaatgctgagaataatggtcca
tatgaaagttctgggatccagcttgttggtaaatcacaagagatgaatgttgacttagtt
ggacagaatatgcaaaatgaacaaacaatgcttgacagagatacattgatagagatatct
tttgaatatgattgcaagaataagttcgcaaatgatgaggatgatatattttctagttta
gtaggaggaaatccagtggcaatctttggtgctgatgatactgcagcaaccgaacaacct
tctcattctgattcagattgtgattgggaagaaggaattctcgaaggtaagagtaatgct
tatcctgaacatgacgtggtagaattgaagtcttctgttgcagatgatcataaaaataat
gaaagagaagtagaatgggaggaaggagattgtgatggtgctaacagcaccttactgtca
ggaaaattggcatctcaagggtggttggaggaggagtctgatttgcaagaggcaataagg
agaagtcttgaaagtataggggatatgaaacttaaatgcatgccagctgtagatgagcat
tcaaatacttatgagaacaaattggattgtggtttagaacatggtgatgatctgtattat
tctgaccctgtggatttaaatgacaacgttgggtttctgaataataaaaatagggaagac
agtactgaaaaaaatgaattacatgaaattgaagatggagataaaaagcatgattttgtt
tctggcaataatgaacaaactttccattttcatggaagtcagtcaaagtcatctgtgact
tttaattccaataacactgagatattgatcgacacaccttgcagaatggacagtcactct
tgttttgtagattcaatttcagatacaaatgtaatgacgaaggacctagtccctatggtt
gctgagcaattattggataaacatgatgatggtaaagtgtctttctattgtgacaataca
tccaaggttgatccagttggtgcaactgaagaggggaaaaaaaactatattcaagaatct
gaaccattgagtaattctactgacactaccaaacctgctattttggtagagtcatccttg
aaaggatcaacagaagaccttgatattgagccaaaattgccttcagaggacagtaataga
aatttctacgaggaaaggaatagtagccttggcaatgatgtggttaacaccccgggacat
tttcctgctcatgcagctgaggttagcttggaggaagaaatgcaaattcttggtcaagaa
tatatcaacctagaaaatgagcagaggaagctagagcggaatgcagaatctgtaaacagt
gaattattcactgaatgtcaggaactactgcaaatgtttggcttgccatatattattgct
ccaatggaagcagaagctcaatgtgcttatttggaacttgagaaactagttgatggtgtt
gtgactgatgactctgatgtccttttatttggggcacgcagtgtttacaaaaatatattt
gatgaccgcaaatatgtagagacatacttcatggaggatattgaaaaggagcttggattg
accagagaaaaattaatacgcatggctctacttcttgggagtgattatactgaaggtgta
agtgggattggcattgttaatgctattgaggttgtgaatgcattccctgaggaagatggc
ctcctgaaattccggcaatgggttgagtcaccggatcccaccatccttggaaggttggat
gcaaatagtggttcaaattccagaaagaaagggtcaaaaattgaagaaaagatgaattcc
tcaagttgcaatgttaaagagtctgcggtgatgcaaaacatctgccatgctcaggagcaa
aatgagttgtcagattacatccaagaaataaaacaaactttcttcaataagcatagaaat
gttagcaagaattggcacattccttcttcttttccaagtgatactgttatatctgcttac
tattctccccatgttgataaatccactgagccattcacatggggaaagccagatcatctt
gttcttcgaaaattgtgctgggagaaatttgggtggactggccagaaagcagatgaattg
atcctaccagtcttaaaggagtataacaagcgtgagactcaattgcggttggaagcattt
tacaattttaatgaaagatttgcaaaaattcgtagtaaaagaattaagaaagcggtaaaa
ggaatcactggtaagcagccttcagatttgatagatgattctgcagaagagttctccaag
agtaggaagactgggagagaacctgaggatatcacattggagacttcaaggggaatagag
ggaaatcttgagggtagaaggaaatcaaaaataaaacagtcaaggaagaatgatactgtt
gctaaggaacagtcaaagaaaaagaaagtcaatgatgatccctcttcagcacctggtaca
tctgagattgagaatttacagccaagtctgcagatagaagaagagcaacatgatggtaag
gcattgattcggaatagaagtggcagaggaagaggtagaattatgggaataaaaagagga
agggataacaaaggtctcagttttcaatcttgcgaaactgaagcctcatctggtagcagt
gacattgatgatcatgggccaagagtgcatgtggatagagttccaaaagatgtgcgaagg
tcaatgcgatctcggaaacctgtcaactattctttcaaagagcctgaagatgaagattct
gatgattcatttgatcggagaaatcagactggtccaatagaagaaaatttatctcatatt
cttggtgcttgtgaagatggtgcaacagatttcagcatggcgaaagaatgcagtgcaatg
aattttcctccagaggagaacttgcctacagactcccttgagtcaggtggttggttttgc
acagatgccggtgaaacttgtcatcctggtactggcaatcaggactcttctgatgactac
cttaaaatgggaggtggattctgtttagatgatggtgatacaggtgtcaagcaggataca
agtgacaatgtcgatactgctacagtcgattataatgcagactttccacacggttctgat
tatttggatgaaactaatcgtgataaaagtagttcagatatattattttctggcgctgaa
aagcctgaaaatgggatacaaggtggagggccattcaatatagagccaaatgaccttgca
agtgctagtagttatgatcattctgatatagcggtcttgaaacaggagaatactcgcaac
aatagtggagcctccactggagcatttagtgccatgccgtttttgaagagaagaaggaaa
aactga

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