KEGG   Glycine soja (wild soybean): 114413044
Entry
114413044         CDS       T06057                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
gsj  Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gsj03041]
    114413044
Spliceosome [BR:gsj03041]
 Complex B
  Other components
   Complex B specific factors
    114413044
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd EIF3I WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_EML WD40_Gbeta LisH_TPL NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_Nup120_160 Beta-prop_ACSF4 Beta-prop_NWD2_C Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd DUF7165 Beta-prop_WDR19_1st Beta-prop_HPS5 VPS8_N Beta-prop_IFT122_2nd Beta-prop_LRRK2 Beta-prop_IP5PC_F zf_topless Beta-prop_ELP1_2nd
Other DBs
NCBI-GeneID: 114413044
NCBI-ProteinID: XP_028232998
LinkDB
Position
5:37996827..38005374
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLHQTFQMLQNECQVSLNTVDSIETFVADINSGRWDAI
LPQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLDH
LLVRTYFDPNEAYQDSTKEKRRAQIAQALAAEVTVVPPSRLMALIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVDDMYPTTLSHTIKFGTKSHAECACFSPDGQFLVSCSVDGFIEV
WDYISGKLKKDLQYQADEVFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLR
RLERAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDAIFTND
GSRVITASSDCTIKVWDVKTTDCIQTFKPPPPLRGGDASVNSVHIFPKNTDHIVVCNKTS
SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNMYCFSYQSGKLEHLM
KVHEKEVIGVTHHPHRNLVATFSEDCTMKSWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctacgctcgaaattgaagctcgagatgtcatcaaaattgtgcttcagttttgcaaa
gagaattcgttgcatcagacttttcagatgctgcagaacgaatgccaggtttctctgaac
actgttgacagcattgaaacctttgttgctgatattaatagtggaagatgggatgcgata
ttgcctcaagtttctcaactcaagcttcccaggaataagttggaggatttgtatgagcag
attgtattagaaatgattgaacttcgagaactggatactgcacgtgctattttaaggcaa
acgcaggtgatgggtgtaatgaaacaagagcagcctgaaagatatttgcgtcttgatcat
ctcctagttagaacttattttgatccaaatgaggcttatcaagactcaacaaaagagaag
cgacgtgcacaaatagcccaagctcttgcagcagaagttactgtagtgccaccatcccga
ttgatggctttaattggtcaggctttgaagtggcagcagcatcaagggttacttcctcca
ggaacgcaatttgatttgtttcgtggaacagctgctatgaaacaagatgtggatgacatg
tatccaacaactctttctcacacgataaagtttgggacaaaaagtcatgcagaatgtgct
tgcttttcaccagatgggcagtttcttgtatcatgctcagttgatgggtttattgaggtg
tgggattacataagtggaaagctgaagaaagatctacagtaccaggctgatgaagtgttc
atgatgcatgatgatgctgtgctttgtgtagactttagcagagattcagaaatgcttgca
tctgggtctcaagatggaaagattaaagtctggcgtattaggactggtcagtgcttacgg
cgtcttgaacgtgctcattctcaaggtgtcacaagtgtttccttctcccgtgatggaagc
cagttattaagcacttcatttgacagcacagcaagaattcatggcctcaaatctggaaag
atgttgaaagagttccgtggccatacatcttatgtgaatgatgcaatttttacaaatgat
gggagtcgtgttattactgcctcaagtgactgtacaatcaaggtctgggatgtgaaaact
acagactgcatacaaacttttaagccacctcctcctttaaggggaggtgatgcttctgtc
aattctgttcacattttccccaagaatactgatcacattgttgtttgtaacaaaacgtca
tccatatatatcatgacacttcaaggacaggttgtgaagagcttctcatctggtaaaaga
gaaggtggagactttgttgcagcctgtgtttcacctaaaggagaatggatttactgtgtt
ggtgaagacaggaatatgtactgcttcagctatcaatctggcaaattggagcatctaatg
aaggtccacgagaaggaagttataggtgtcactcatcatccccataggaatcttgtcgca
acatttagtgaagactgcacaatgaagtcgtggaagccatga

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