Glycine soja (wild soybean): 114413187
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Entry
114413187 CDS
T06057
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27-like isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gsj01002
]
114413187
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsj04131
]
114413187
04121 Ubiquitin system [BR:
gsj04121
]
114413187
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114413187
Peptidases and inhibitors [BR:
gsj01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114413187
Membrane trafficking [BR:
gsj04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
114413187
Ubiquitin system [BR:
gsj04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114413187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
114413187
NCBI-ProteinID:
XP_028233240
LinkDB
All DBs
Position
5:complement(39210316..39215204)
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AA seq
565 aa
AA seq
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MRFDENAMNWIGATVGDLVGTVGAILSLKDTKVAIPFTFAADNSSFEKSLFVPGLQNLQN
NCFLNVVLQALASCFCFQSFLHGVIGECGSKDLDENMPLALALATLLEELSSVSAERVTL
SPRKMMLAMSNNIPNFNLTSQQDAAEAFLHLLCLLREEFGGCYAPKMSSLADIFASNNRI
LTPIQRDCQSEQERWQQLFLGPFDGILGSRLTCQSCSSLISINFEHFDCLPLSPVLSDTS
SMRVGCTLVDCLKQFIVAEHVENYRCSHCWHNAAIKYLSIMEGNEVELKMIRRCSDPEIC
NCRKMYNLDKLPWSNRFSHTLKQLSIARCPRILCIQLKRVYMNVFGELVKLQNFVVMMVM
QGHISFPLILDVLSFMTTRLGVKTQDIDVQSLPLNLKYNRRNFFPNHSDLQSEISTLKFS
GLYGATREQINSDGVIDDGFVSSTNGQALHSDTVFPCSGSSESIHSDTHMQSIDQVDVSC
NLVPQETCLYQLVSVVEHFGKAGSGHYTVYRSVRVESSEDVSDDYLNQTPMRWFCISDSQ
VHAVSVEGVLSSEASLLFYERIPRN
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttgacgagaacgctatgaattggattggcgctaccgttggtgacctcgtgggc
acagtgggtgcaatattatcactaaaagataccaaagtggcgattccgtttaccttcgct
gcagacaatagtagcttcgagaaatcgctctttgttccgggtttgcaaaacctccaaaac
aattgtttcctcaacgttgttttgcaggctctagccagctgtttttgctttcagagtttt
cttcacggtgtgatcggagagtgcgggagtaaggacctggatgaaaacatgcctcttgca
cttgctttggctactttgctagaagagctgagttcagttagtgcagaaagggttacattg
agtcctcgaaagatgatgcttgccatgtccaataacattccaaattttaatctaactagc
cagcaggatgcagctgaagcatttctccatctgttatgcttattgagagaagaatttgga
ggttgttatgctccaaagatgagttctttagcagacatttttgcttctaataatagaatt
cttactccaatacagagggactgccaaagtgagcaggagagatggcagcaactcttcctt
ggaccttttgatgggattcttggcagccgcttgacctgtcaaagttgttcatccctgatc
tcgattaacttcgaacattttgattgtttgcctctttcacctgtgcttagtgatacttcc
tcaatgagagttggttgtaccctggtggattgcctgaagcagttcattgttgctgaacat
gttgaaaattatcgctgcagccactgttggcataatgctgcaatcaagtatctttctata
atggaaggaaatgaggtagaactcaaaatgataaggagatgctctgacccagaaatctgc
aattgccgaaaaatgtataatcttgataaactaccctggtcaaacaggttttcacatact
ctgaagcagctaagtattgcaaggtgcccaaggattttatgcatccagttgaaaagagtt
tatatgaatgtctttggagagctagtcaaactgcagaattttgttgtgatgatggtaatg
cagggccatatttcttttccattgattttggatgtgttgtcattcatgacaactagactg
ggagtaaagacacaggacatagatgtacaaagtttgccattaaatttgaagtataacaga
agaaattttttcccaaatcattctgatctgcaatctgagataagtacattgaaatttagt
ggcctttatggagcaacaagagagcagatcaattcagatggtgttattgatgatggattt
gtctcctctacaaatggacaggcacttcatagtgacactgtatttccctgctctggttct
tcagaaagcattcactcagatacacatatgcaatcaattgaccaggtagatgtttcttgt
aatttagttcctcaagaaacatgtttgtatcaacttgtttctgttgtggaacactttgga
aaagctggaagtgggcattacactgtttacagatctgtaagagtggagtcttcagaagac
gtctctgatgattacctcaatcaaactccaatgcgttggttttgtatttcagattctcaa
gtgcatgctgtttcagtggaaggtgttctttccagtgaggccagcttgcttttctatgag
agaattccaaggaactga
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