Glycine soja (wild soybean): 114413204
Help
Entry
114413204 CDS
T06057
Name
(RefSeq) autophagy-related protein 13b-like
KO
K08331
autophagy-related protein 13
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
114413204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsj04131
]
114413204
03029 Mitochondrial biogenesis [BR:
gsj03029
]
114413204
Membrane trafficking [BR:
gsj04131
]
Autophagy
Autophagosome formation proteins
ULK complex
114413204
Atg1 complex
114413204
Mitochondrial biogenesis [BR:
gsj03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
114413204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
114413204
NCBI-ProteinID:
XP_028233266
LinkDB
All DBs
Position
5:39384392..39390348
Genome browser
AA seq
618 aa
AA seq
DB search
MASSHGNAHSDAAKMEQIITEFFAKSLHIILESRALYVSSRNSYGDQAVSSPCSSSSSSS
NVRPRDKWFNLALRECPAALENIDLWRQNNLECIVIDVILVQRPLVSVSFSPKRVIPRSS
SLKERCPFGWNTDQEELGVVGRSEKIVERWVVQYESRKTRDSNSGSRRSSNVSLHNLYKK
STLLLRSLYVTVRLLPAYKLFRELNSSGQIRDFTLAHRVSSFVEPFTRKEEAEMTKFGFT
PVDTSSGRLCLSVMYCSLASDVSSEPSTPMSPQVITDYVGSPLADPLRRFPSHLVAGLPS
HGSPSSLPSSRQRSWSFDHYRASPPSYLPSPTHSESLSSVYNASLPPHPTEMSMIQKKNT
NFEDYHHSASPSISNSGPFPCKPLLRSESAPVSIPIAEIANSPGYSNSHNVPPSPPLRGS
RGTAKIDRNTMQTGATAEKLFSLGKDESRKYSGVKISANSSPQISISRSSSRSYQNDFDD
TDFTCPFDVDDDDMTDPGSRAESLDHGHMTETLEAGGFFPIRKSQDAAVGVLVHMLKKAP
PLRQDFSTSQHLSQGSHPETRNHNTRGPNQILEPSRPVSIMSSGIIATRKTTADALEEFH
GYKEMKNLLLTRGSKHQI
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtctcatggtaatgcacactcggatgccgcgaagatggaacaaataatcacc
gagttcttcgcgaagagccttcacataatacttgaatcaagggcactctatgtgtcctcc
cgtaattcctatggtgatcaagctgtttcgtcaccgtgttcgtcgtcttcgtcttcatca
aatgtgcggccgagggataagtggttcaatttggcgctccgggagtgccccgcggcgttg
gagaacattgacctctggcgccagaacaatctagagtgcatagtgattgatgtgattttg
gtgcagaggcctctggtgagtgtgagtttttctcccaaaagggttattcctaggagttct
tcactgaaggaaagatgcccttttggctggaacactgatcaggaagaattgggggttgtg
ggaaggagtgaaaagattgtggagaggtgggttgtgcagtatgagagtaggaagacaagg
gattctaattctggcagtaggaggtcaagcaatgtttctttgcataacttgtataagaaa
tcaactttgcttctgaggtctttgtatgtcactgttagacttttacctgcatataaactt
ttcagagagcttaattcgtctggacagattagggacttcacccttgctcaccgtgtgtct
tcttttgttgagcccttcacccggaaagaagaggctgaaatgacgaaattcgggttcacc
cctgtggatacttcttctggtaggctgtgtcttagtgtgatgtattgttccttagcctca
gatgtgagttctgaaccttcaactccaatgtccccacaagttataactgactatgttggg
agtccattggctgatccattaaggaggtttccttctcatctcgtggcaggattgccatca
catggctctccatcatcgttgccatcttcaaggcagcgtagttggagtttcgatcattat
agagcctcacctccttcttatttaccttcgcctactcattcagaatcactctcatcagtg
tataatgcaagtttgcctcctcatccaactgagatgtctatgattcagaagaagaataca
aactttgaggattatcatcactctgcatcaccttcaatctctaattctgggccatttcca
tgcaaaccacttttacgatctgaaagtgctccagtcagcatacctattgctgaaattgct
aattcccctggatactccaatagtcataatgtgcctccatctcctcccctaagaggttca
aggggcactgctaagattgatagaaacacaatgcaaacaggagcaacagctgagaagttg
ttttctcttggaaaagatgagtctcgaaaatattctggagtcaagatatctgctaacagc
tcgccccagatttcaatttccagaagctccagtaggtcttatcagaatgattttgatgat
actgattttacttgtccatttgatgtggatgatgatgatatgacagatccaggaagcaga
gctgaatctcttgatcatggtcatatgactgagacgcttgaagccggtggattctttccc
attagaaagtctcaagatgctgctgttggtgtgcttgtacatatgctgaaaaaagcacca
cctctacgtcaagatttctccacctcacaacacctgtcacaaggttcacaccctgaaact
cggaaccataacactcgagggcccaatcagatccttgagccatcaaggcctgtgagcata
atgtcttctgggatcatagccactaggaaaacaacagctgatgcattggaagagttccat
ggttacaaagaaatgaaaaacttgctgcttacgcgaggtagtaagcaccagatatag
DBGET
integrated database retrieval system
