Glycine soja (wild soybean): 114413665
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Entry
114413665 CDS
T06057
Name
(RefSeq) nuclear pore complex protein NUP155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114413665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114413665
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114413665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
114413665
NCBI-ProteinID:
XP_028233975
LinkDB
All DBs
Position
5:complement(43399577..43409211)
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AA seq
1485 aa
AA seq
DB search
MSWEDEIVMRDVTNAGLVISDRIGREVSSQLDLEEALEASRYASHPYSTHPREWPPLVEV
VNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEFSGE
EQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCSGGADGSDPFAEVTLQPLPE
HTIPSDGVTMTCVACTNKGRIFLAGRDGHIYEILYSTGSGWQKRCRKICITAGLGSVISR
WVIPNVFSFGAVDPIVEMVFDNERQILYARTEEMKLQVYVLGPNGDGPLKKVAEERNLVN
QRDAHYGARQSTGSRVSSRSPKPSIVCISPLSTLESKWLHLVAVLSDGRRMYLSTSPSSG
SLTGFNTNHHKPSCLKVVTTRPAPPWGVSGGLTFGAMALAGRPPNEDLSLKVEAAYYSAG
TLILSDASPSTMSSLLVLNRDSSSQSSPSGNLGTSTRSSRALRESVSSLPVEGRMLSVAD
VLPLPDTAATVQSLYSEIEFGGYESSMESCERVSGKLWARGDLATQHILPRRRIVVFSTM
GMMEIVFNRPLDIIRRLLESNSPRSVLEDFFNRFGAGEAAAMCLMLAARIVHSENLISNV
IAEKAAEAFEDPRVVGMPQLEGSNALSNTRSAAGGFSMGQVVQEAEPVFSGAHEGLCLCS
SRLLFPLWELPVMVVKGSLGPSGTLSENGVVVCRLSVGAMQVLEQKLRSLEKFLRSRRNQ
RRGLYGCVAGLGDLSGSILYGNGSALGAGDRNMVRNLFGAYSRNMESNGGRTSNKRQRLP
YSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLIQGFDSNLQQALVQLTFH
QLVCSEEGDHLATRLISVLMEYYTGPDGRGTVDDISRRLRDGCPSYYKESDYKFFLAVEA
LERAAMTIDAKDKENLAREAFNSLSKVPESVDLRTVCKRFEDLRFYEAVVRLPLQKAQAI
DPAGDAYNDEIDATVREQALAQRGQCYEIIIGALRSLKGDTLQREFGTPIRSTASQSALD
PASRKKYICQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLPFLQSAGRNSL
HEVRAVTATISPVGQSGAPMSSNQVKYYELLARYYVLKRQHMLAAHALLRLAERRSIDGV
PTLELRCQYLSNAVLQAKNATNSDGLVGSGRSSIDSGFLDLLEGKLAVLRFQIKIKEELE
SVASRSDVLPATPDSAENGVVPEGSSTADANFANATREKAKELASDVKSITQLYNEYAVP
FGLWEICLEMLYFANFSSDTDSSIVRETWARLIDQAISRGGIAEACSVLKRVGPRIYPGD
GAVLPLDIICLHLEKAGLERLNSGVEAVGDEDVARALVSACKGAAEPVLNAYDQLLSNGA
ILPSASVRLRMLRSVLVVLREWAMSVYSQRMGSSAAGHSLILGGGFSSERTIASQGIRDK
ITSAANRYMTELRRLALPQNQTEHVYRGFRELEESFISQHSFDRF
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggaagacgagattgtgatgcgcgatgtcacgaatgcgggccttgttatcagc
gatcgcattggtcgtgaagtttcgtctcagctcgacctcgaagaagctctagaagcttcc
agatacgctagccacccttattccactcacccccgagagtggccccctttagttgaggtg
gtgaatacctgggagttgcctcccgtgctcattgaaagatacaatgcagctggtggggaa
ggaactgctttttgtggaatatttcctgaaatacgaagggcgtgggcgtctgtggacaat
tcattgtttctttggcgttttgataagtgggatggccaatgtcctgaatttagtggggaa
gagcaagctatttgtgcagttggtcttgcaaaatcaaaacctggagtttttgttgaagct
attcaatatcttttagttttagcgacacctgttgagttaattttagtaggagtatgctgc
tctggaggagcagatggttcagatccatttgcagaagttacattgcagccattgccagag
catacaataccatctgatggggttacaatgacttgtgtggcatgtactaataagggccgc
attttccttgctggtcgggatggccacatatatgagattctttattcaactggttctgga
tggcaaaaacggtgcagaaaaatctgcatcactgctggtttgggaagtgtaatttcaaga
tgggttataccaaatgtattcagttttggagctgttgaccccattgttgaaatggttttt
gacaacgagagacaaatattgtatgcacgaacggaagagatgaagcttcaagtttatgtt
ctaggaccaaacggtgatggccccttaaagaaagtagctgaagaaaggaatcttgtcaat
cagagggatgcacattatggagctagacaatcgacagggtcaagagtctctagtcgatct
ccaaagccatctattgtttgcatctcacctttatctacacttgaatccaagtggctacat
cttgttgctgttttatcagatggcagaaggatgtacctatctacctctccttctagtgga
agcttgactgggttcaacaccaaccaccacaagcctagctgtttaaaggttgtcactaca
aggcctgctcctccttggggtgttagtggtggtctcacctttggagccatggctcttgct
ggtagacctccgaatgaggatctctccctgaaagttgaggcagcttattattctgctgga
actcttatcctttctgatgcatcaccttcgaccatgtcttcactccttgttttgaacagg
gattcaagctcacaatcatcaccgtcgggtaatctaggaacaagtacgagaagttcccgg
gcattaagggagtcggtatcttctttaccagttgaaggacgaatgctttctgtggcagat
gttttacctttgccagataccgcagctactgtgcagtctctatattcggaaattgagttt
ggtggttatgagagctctatggaatcatgtgaaagggtgtctggcaaactctgggcaaga
ggggatcttgcaacccaacatatactaccaagaagaaggattgtcgtcttcagcaccatg
ggcatgatggaaattgtttttaacaggccactggacattataaggcggctattggaatcc
aactctccacgatcagttttagaagatttcttcaatcgttttggtgcaggtgaggcagct
gcaatgtgtctaatgttagctgcaagaatagtgcattctgaaaaccttatcagcaatgtt
attgctgagaaggcagctgaagcttttgaggacccaagagttgttggcatgccacaactt
gaaggtagtaatgcattatcaaacacaagaagtgctgctggtggatttagcatgggccag
gttgttcaggaggctgagcctgtattttcaggtgcacatgaagggctctgtttgtgttca
tctagattactttttcctctgtgggaacttcctgtaatggttgtaaagggaagtttaggc
ccttcaggcactctatctgaaaatggagtagttgtgtgcagactctctgttggggctatg
caagtccttgaacagaaactccgatctttggagaaattcttaagatctagaaggaaccag
aggaggggactttatggctgtgtagcaggtttaggagatctgagtggttccattctgtat
ggtaatggttcggcattaggagccggggatcgaaacatggtaagaaacttatttggtgcg
tattccagaaatatggagtccaatggtggcagaacatctaataaacggcaaaggttgcca
tatagtcctgctgaattagctgccatggaggtgagggcaatggagtgcattaggcagttg
ctccttagatctggtgaagccctatttttgcttcaacttctttcacagcatcacgtgact
cgattgattcagggatttgattctaaccttcaacaagcattagttcagttgacatttcat
caactagtttgttctgaggagggtgaccatcttgctacaagacttatatctgttctcatg
gagtattatactggtcctgatggcaggggcactgtagatgacattagtaggagattgaga
gatggttgtccaagctactataaggagtctgattacaaattctttttagccgtggaagcc
ctagagagagctgctatgactatagatgctaaggacaaggagaatcttgcaagggaagca
tttaattccttaagtaaagttccagagtctgtggacctacgaactgtttgcaaacgtttt
gaggatttaagattttatgaagctgttgtgcgcttaccactacaaaaggcacaggctatt
gaccctgcaggcgatgcttataatgatgaaattgatgcaactgtcagagagcaagcactt
gctcagcgggggcagtgttatgaaataattatcggtgctttgcggtctctgaaaggtgac
accttacagagagaatttgggactcctattagatcaactgcttcacaatctgctcttgat
ccagcctctcggaaaaaatatatatgtcaaattgttcagctgggtgtccaatcacctgac
agaattttccacgagtatctttaccaggctatgattgatttaggtctcgagaatgaattg
ctagagtatgggggtcctgacctgttgccatttttgcaaagtgccggtcgtaattctcta
cacgaggttcgtgctgtgacagccacaatttctccagtgggacaatcgggagcacctatg
tcatctaatcaagtcaagtactatgaacttttggcacggtattatgttttgaaacgccaa
catatgcttgcagctcatgcgttgcttagactagctgaaaggcgttctattgatggagtt
cctactcttgaactgaggtgtcaatacctaagtaatgcagttctacaggccaaaaatgca
actaatagtgatgggttagtaggttctggtcgaagttccattgacagtgggttcctagat
ttgcttgaagggaagcttgctgttcttcggttccagataaaaatcaaagaagaactagag
tctgtggcttccaggtctgatgttttacctgccacaccagattctgctgaaaatggtgta
gtgcctgagggaagttctactgctgatgctaattttgcaaatgcaacacgagagaaggct
aaagagctagcttcagatgtaaagagcataacccagttatataatgaatatgctgttccc
tttgggctctgggagatatgcctggagatgctgtactttgccaatttttccagtgatact
gacagcagcattgtcagagagacatgggctagacttatagatcaagctatatcaagaggg
ggtattgctgaagcttgctcagtactaaagagggtcgggccccgcatttatcctggtgat
ggagctgttttaccactcgacattatttgtcttcacttagagaaggctggactggagagg
ttaaattctggggttgaagctgttggagatgaagatgttgcaagagcccttgtttctgct
tgtaagggtgcagctgaacctgtattgaatgcatatgaccaattgttatcaaatggggct
attttgccatccgcaagtgttagattacgtatgctgagatcggttctagtggtacttcga
gagtgggcaatgtctgtatattcacaaagaatgggtagcagtgccgctgggcattcccta
atactaggtggaggattctcatcggaacgtactattgctagccaaggaattcgggacaag
atcacaagtgcagcaaacaggtatatgactgaattgcggaggttagcccttccacagaac
caaacagaacatgtctaccgaggttttagagaacttgaagaatcgtttataagccaacat
tcatttgatcgattttga
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