Glycine soja (wild soybean): 114414033
Help
Entry
114414033 CDS
T06057
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
114414033
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsj04040
]
114414033
Ion channels [BR:
gsj04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
114414033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
114414033
NCBI-ProteinID:
XP_028234204
LinkDB
All DBs
Position
6:complement(15931980..15938151)
Genome browser
AA seq
684 aa
AA seq
DB search
MSSDLYRFAVSSHFSSFPKSFSLRKKVPWWYQILDPRSRFVARWNRTFLYVCIVALFLDP
LYFYFPITGDKACMQTDIVLGVFVTFSRTIADLFFLFHMVLKFRTAFVSPLSSVYGRKDL
VTDPRQIASRYLRSDFAIDLFATLPLPQIVIWFVIPAVKDSTAAHVNHTLSLIVLIQFIP
RLFQIFPLQRRILKTSGLIAKTALAGALYNLGSYMLASHVLGASWYVSSIQRQYECWIIT
CKKEMNRTHSPSCNPSFLDCGTLADHERQAWFKRTRVLTACDALNDKNEFQFGMFADAFT
DHVSSSRFFQKYFYCLWWGLKNLSSYGQNLQTSTYSGETLFSSFICIAGLILFAHLIGNM
QNYLQSSTAKVEEWRLKQKDTEEWMNHRQLPPELQQRVRRFVQYKWLATRGVDEEAILRA
LPLDLRRQIQRHLCLDIVRRVPFFGQMDDQLLDAICERLVSSLNTKDTYIVREGDPVREM
LFIIRGQVESSTTDGGRTGFFNSITLRPGDFCGEELLTWALMPSSTLNLPSSTQTVKTLT
EVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRAWGAHFIQAAWRRHRKRKLAM
ELLKENLYYTNVVEDDDDEEGSAGESSMAGHTQNFGATFLASKFAANTKKGAIKKVAIKL
PDADSLKMPKMFKPTEPDFSTFHD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgatttgtaccgattcgcagtatcatcccacttcagtagttttccaaaatcg
ttctccctccgtaagaaagttccatggtggtaccagatcctggacccgcggtcgaggttc
gtggcgcgatggaaccgcacgttcctctacgtgtgcatcgtggctctcttcctggaccct
ctctacttctacttccccatcaccggggacaaggcctgcatgcagaccgacattgtcctc
ggcgtcttcgtcacgttctcccgcaccatcgctgacctcttcttcctcttccacatggtc
ctcaagttccggacagcttttgtctctcccctctccagcgtctacggccgcaaggacctc
gtcaccgatcctcgccagatcgcttcgcgctacctccgctccgatttcgccattgatctc
ttcgccacccttcctctgcctcagatagtgatctggttcgtgattccggcagtgaaagat
tcaacggcggctcatgtaaatcataccctgtccttgattgttctcattcagtttattcct
cggttgttccagatttttcctctgcaacggagaatcttgaagactagtgggcttattgcc
aaaactgccttggcaggggccttatacaatcttggatcctacatgctagccagccatgtt
ttaggagcttcgtggtacgtgtcatcgattcagcggcagtacgagtgttggataataaca
tgcaagaaggagatgaacagaacgcactctccatcatgtaacccttcctttctcgactgt
ggcaccctcgccgaccatgaaaggcaagcttggttcaaacgcaccagagttctcaccgca
tgcgatgccctcaatgataaaaacgagtttcagtttggaatgttcgctgatgctttcact
gatcacgtctcctcatcaagattcttccagaaatacttttactgcctctggtggggtttg
aagaatttaagttcgtatggacaaaatcttcagacaagcacttacagtggtgaaacattg
ttttcaagtttcatatgcatcgcaggtctaatcctgtttgcgcatctcattggtaacatg
cagaattatctgcaatcttcaactgcaaaagttgaagagtggagacttaaacagaaagat
acagaagagtggatgaatcaccggcaacttccaccagaactgcaacaacgtgttcgacgg
ttcgttcaatataaatggcttgccaccagaggagtggacgaagaagccattttgcgcgct
ttgcctttggaccttcgccgccagattcagaggcatctctgtctcgacattgttcgccga
gttccattttttggccaaatggatgaccagcttctagatgcaatatgcgaacgtcttgtg
tcatcgttaaacacaaaagacacatacatcgttcgcgaaggcgatccggtgagagaaatg
ctcttcatcatcagagggcaagtagagagttccacaaccgatggtggaagaacaggtttc
ttcaactccatcaccctcaggcccggcgacttttgcggcgaagaattgctaacatgggcc
ttgatgccctcttcaactctcaatctcccatcttccactcagacagtgaagaccctcacc
gaagtggaagcatttgccttaagagccgaagacctcaaattcgtggcgagccagttcaag
cgcctacacagcaagaaattgcaacacgcttttaggtactattcgcatcagtggagggct
tggggggcacattttatacaagctgcgtggagacggcaccgcaagaggaaattggcgatg
gagttgttgaaggagaacttgtactacacgaatgtggtggaagatgatgatgatgaagaa
ggtagtgcaggagagagttcaatggcggggcatactcagaattttggggccacatttttg
gcttcgaaatttgctgcaaacactaagaaaggggcaattaaaaaggtggctattaaactt
cctgatgctgatagtttgaagatgcccaagatgttcaaacccacggaacctgatttctca
acattccatgattag
DBGET
integrated database retrieval system
