KEGG   Glycine soja (wild soybean): 114414387
Entry
114414387         CDS       T06057                                 
Name
(RefSeq) histone deacetylase 19-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03082  ATP-dependent chromatin remodeling
gsj03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    114414387
   03083 Polycomb repressive complex
    114414387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gsj03036]
    114414387
Enzymes [BR:gsj01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     114414387
Chromosome and associated proteins [BR:gsj03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     114414387
   HDAC complexes
    Sin3A-HDAC complex
     114414387
    BRAF-HDAC complex
     114414387
    REST complex
     114414387
    SHIP complex
     114414387
    MiDAC complex
     114414387
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     114414387
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    114414387
  Chromatin remodeling factors
   NuRD complex
    114414387
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 114414387
NCBI-ProteinID: XP_028234432
LinkDB
Position
6:6694..19302
AA seq 497 aa
MDTGGNSLPSAPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VHKPFPARDRDLCRFHADDYVAFLRSITPETQQDHLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHDQCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGI
DDESYHFLFKPIIGKIMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSWHLLEEIRSKLLENLSKLQHAPSVQFQERPPDSDLGEADEDHDDGDGPWDPDSDMDI
DVERELVSSKVKKEISEHQPNDLEDQTSGEHLRGSDTAVAETCMKALDISCQKADEDNVK
VEQNTVNDLAKETDLKC
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggataccggtggcaattctttaccatctgcacctgatggggtgaagagaaaggtgtgc
tatttttatgatccggaggttgggaattactattatggtcaaggtcacccaatgaagcca
catcgtatacggatgacacatgctcttctagcccattatggattgctacagcacatgcag
gtccacaagccatttcctgctagagacagggacctttgtcgttttcatgctgatgattat
gttgcattccttcgaagcataactcctgaaacacagcaggatcatctaaggcaactgaaa
cgctttaatgttggtgaagattgtcctgtttttgatggcctctactctttctgtcaaact
tatgcagggggttcagttgggggtgctgtcaagttaaatcatgaccaatgtgatattgct
gtcaactgggctggagggttgcatcatgccaagaagtgtgaggcttctgggttttgctat
gttaatgatatagtccttgcaatcttagaacttctcaaacagcatgagcgtgttctatat
gtggacattgatatccaccatggagatggtgtggaggaagctttctacactactgacaga
gtcatgactgtttctttccataaattcggtgactattttcctggaactggggatgtacgt
gatattggatatggaaaaggaaaatattactctcttaatgttccacttgatgatggcatt
gatgatgagagttatcattttttgttcaaaccaataatcggaaaaataatggaagtgttc
cggcctggtgcagtagttctccagtgcggtgctgattctttatctggagaccgattggga
tgtttcaatctttcaattaggggtcatgcagagtgtgtcaaatacatgagatcattcaat
gtgcccctcttgctactaggtggtggtggctacaccattcggaatgttgctcgttgttgg
tgctatgagacaggagttgctcttggaatagaagttgatgacaaaatgccacagcacgag
tattatgaatattttggtccagattatacccttcatgttgccccaagtaacatggaaaac
aagaattcctggcatttacttgaagaaattcgatctaaactacttgaaaatctttccaag
ctgcagcatgctcctagtgtccaatttcaggaaaggcctcctgattctgatcttggagag
gccgatgaagatcatgatgatggagatgggccatgggatccagattctgacatggacatt
gatgtcgaacgtgagcttgtctcgagcaaagtaaagaaagaaatttctgaacatcagccc
aatgatctggaggaccagacaagtggagagcatttgagaggctctgatactgcagttgct
gaaacttgcatgaaggctctagatatttcttgtcagaaagctgatgaagataatgtgaaa
gtagaacaaaatactgtgaatgatttggccaaagagacggacctgaagtgttaa

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